CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69091	Canola	mitochondrion, peroxisome, plastid	48.47	95.6
CDY03585	Canola	cytosol	94.43	94.43
CDY45046	Canola	mitochondrion	58.22	88.56
AT1G50110.1	Thale cress	cytosol	87.47	88.2
CDY03587	Canola	cytosol	38.44	82.14
CDY12427	Canola	cytosol	38.44	82.14
CDY45047	Canola	peroxisome	38.16	82.04
CDY03586	Canola	plastid	81.06	80.83
CDY16426	Canola	cytosol	60.72	73.4
CDY71328	Canola	cytosol, peroxisome, plastid	30.64	71.43
CDY22953	Canola	cytosol, peroxisome, plastid	19.78	70.3
CDY27928	Canola	cytosol	20.61	67.89
CDY22959	Canola	cytosol	56.55	64.65
CDY51693	Canola	cytosol	63.51	63.33
CDX82281	Canola	cytosol	62.95	62.78
KRH42010	Soybean	cytosol	62.12	62.64
KRH49893	Soybean	cytosol	62.4	62.57
CDY24619	Canola	cytosol	62.67	62.5
KRH49895	Soybean	cytosol	61.28	61.28
KRH42008	Soybean	cytosol	60.17	58.38
KRH42003	Soybean	cytosol	52.65	56.42
CDY31051	Canola	mitochondrion	45.13	55.67
CDY31050	Canola	mitochondrion	55.71	53.05
CDY20661	Canola	mitochondrion	54.6	51.99
TraesCS4A01G059800.1	Wheat	mitochondrion	57.66	51.88
TraesCS4D01G236800.1	Wheat	mitochondrion	57.66	51.88
GSMUA_Achr3P15170_001	Banana	mitochondrion	55.15	51.83
CDY66609	Canola	cytosol	68.8	51.14
TraesCS4B01G235400.3	Wheat	mitochondrion	56.82	51.13
Os03t0231600-01	Rice	mitochondrion	59.05	51.08
GSMUA_Achr8P26500_001	Banana	mitochondrion	54.04	50.79
CDY20662	Canola	mitochondrion	48.75	50.72
CDY63741	Canola	mitochondrion	47.91	49.14
OQU92960	Sorghum	mitochondrion	56.82	48.92
CDX83089	Canola	plastid	55.99	48.55
CDY68801	Canola	plastid	55.15	48.18
Zm00001d028303_P003	Maize	mitochondrion, plastid	55.99	47.86
CDY57927	Canola	mitochondrion	52.09	47.7
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	58.22	47.18
CDY08161	Canola	endoplasmic reticulum	52.65	46.1
CDX99513	Canola	mitochondrion	7.8	45.9
CDY57926	Canola	cytosol	57.1	45.15
CDY63740	Canola	cytosol	55.99	44.37
CDY54321	Canola	mitochondrion	55.99	40.85

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	GO:A0A078GRS1	UniProt:A0A078GRS1
InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	EnsemblPlants:CDY28146
ProteinID:CDY28146	ProteinID:CDY28146.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004084	GO:GO:0008150
GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009058	GO:GO:0009081	GO:GO:0009082
GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655	GO:GO:0052656	EnsemblPlantsGene:GSBRNA2T00039129001
PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF4	MetaCyc:PWY-5057
MetaCyc:PWY-5076	MetaCyc:PWY-5078	MetaCyc:PWY-5101	MetaCyc:PWY-5103	MetaCyc:PWY-5104	MetaCyc:PWY-5108
SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI0004EE19DA	SEG:seg	:	:

Description

BnaC06g03270DBranched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078GRS1]

Coordinates

chrLK032214:-:541395..543590

Molecular Weight (calculated)

38975.7 Da

IEP (calculated)

6.619

GRAVY (calculated)

-0.152

Length

359 amino acids

Sequence
(BLAST)

001: MAPSVQPSSS PLRTSEGDEK YANVKWEELG FSLIPTDCMY VAKCRQGESF TEGKIVPYGD ISISPCCPIL NYGQGLFEGL KAYRTEDDRI LIFRPHENAL
101: RMQDGAERLC MAPPSVEFFV EAVKQTVLAN KKWVPPPGKG ALYIRPLLIG SGAILGVAPA PEYTFLIYAS PVGDYHKASS GLNLRVDHKS HRAHSGGTGG
201: VKSCTNYSPV VKSLVEAKSS GFSDVLFLDA ATGRNIEEAS ACNIFIVKGN IVSTPPTSGT ILPGITRKSI SELARDIGYQ VQERDVSVDE FLEADEVFCT
301: GTAVVVKAVE TVTFHDKKVK YRTGKEALSK KLHSMLTSIQ TGLVEDTKGW MVDIDPCQG

Best Arabidopsis Sequence Match ( AT1G50110.1 )
(BLAST)

001: MAPSSSPLRT TSETDEKYAN VKWEELGFAL TPIDYMYVAK CRQGESFTQG KIVPYGDISI SPCSPILNYG QGLFEGLKAY RTEDDRIRIF RPDQNALRMQ
101: TGAERLCMTP PTLEQFVEAV KQTVLANKKW VPPPGKGTLY IRPLLLGSGA TLGVAPAPEY TFLIYASPVG DYHKVSSGLN LKVDHKYHRA HSGGTGGVKS
201: CTNYSPVVKS LLEAKSAGFS DVLFLDAATG RNIEELTACN IFIVKGNIVS TPPTSGTILP GVTRKSISEL AHDIGYQVEE RDVSVDELLE AEEVFCTGTA
301: VVVKAVETVT FHDKKVKYRT GEAALSTKLH SMLTNIQMGV VEDKKGWMVD IDPCQG

Arabidopsis Description

BCAT6Branched-chain-amino-acid aminotransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPM9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.