CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16426	Canola	cytosol	54.24	88.22
CDY69091	Canola	mitochondrion, peroxisome, plastid	29.81	79.12
CDY45046	Canola	mitochondrion	37.89	77.54
CDY45047	Canola	peroxisome	26.5	76.65
CDY03587	Canola	cytosol	26.5	76.19
CDY12427	Canola	cytosol	26.5	76.19
CDY03586	Canola	plastid	54.45	73.06
AT1G50090.1	Thale cress	cytosol	53.21	70.03
CDY03585	Canola	cytosol	51.97	69.92
CDY28146	Canola	cytosol	51.14	68.8
CDY71328	Canola	cytosol, peroxisome, plastid	18.43	57.79
CDY22959	Canola	cytosol	37.47	57.64
CDY27928	Canola	cytosol	12.84	56.88
CDX82281	Canola	cytosol	41.61	55.83
CDY51693	Canola	cytosol	41.61	55.83
KRH49893	Soybean	cytosol	40.99	55.31
KRH49895	Soybean	cytosol	40.99	55.15
KRH42010	Soybean	cytosol	40.58	55.06
CDY24619	Canola	cytosol	40.99	55.0
CDY31051	Canola	mitochondrion	32.71	54.3
KRH42003	Soybean	cytosol	34.99	50.45
KRH42008	Soybean	cytosol	38.51	50.27
CDY22953	Canola	cytosol, peroxisome, plastid	10.14	48.51
CDY63741	Canola	mitochondrion	34.99	48.29
CDY20662	Canola	mitochondrion	34.37	48.12
GSMUA_Achr3P15170_001	Banana	mitochondrion	37.47	47.38
CDY31050	Canola	mitochondrion	35.61	45.62
CDY20661	Canola	mitochondrion	35.4	45.36
GSMUA_Achr8P26500_001	Banana	mitochondrion	35.61	45.03
CDY57927	Canola	mitochondrion	36.44	44.9
TraesCS4D01G236800.1	Wheat	mitochondrion	37.06	44.86
TraesCS4A01G059800.1	Wheat	mitochondrion	36.85	44.61
TraesCS4B01G235400.3	Wheat	mitochondrion	36.44	44.11
CDX83089	Canola	plastid	37.68	43.96
Os03t0231600-01	Rice	mitochondrion	37.47	43.61
CDY68801	Canola	plastid	37.06	43.55
OQU92960	Sorghum	mitochondrion	37.06	42.93
CDY08161	Canola	endoplasmic reticulum	36.02	42.44
Zm00001d028303_P003	Maize	mitochondrion, plastid	36.23	41.67
CDX99513	Canola	mitochondrion	5.18	40.98
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	37.27	40.63
CDY63740	Canola	cytosol	36.65	39.07
CDY57926	Canola	cytosol	36.65	38.99
CDY54321	Canola	mitochondrion	37.68	36.99

Protein Annotations

Gene3D:3.20.10.10	Gene3D:3.30.420.10	Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1
GO:A0A078JIR2	UniProt:A0A078JIR2	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	EnsemblPlants:CDY66609
ProteinID:CDY66609	ProteinID:CDY66609.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0005488
GO:GO:0006139	GO:GO:0006259	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015074
EnsemblPlantsGene:GSBRNA2T00054641001	InterPro:IPR001584	InterPro:IPR036397	InterPro:Integrase_cat-core	PFAM:PF00665	PFAM:PF01063
ScanProsite:PS00770	PFscan:PS50994	PANTHER:PTHR42825	PANTHER:PTHR42825:SF4	InterPro:RNaseH-like_sf	InterPro:RNaseH_sf
SUPFAM:SSF53098	SUPFAM:SSF56752	UniParc:UPI0004EDE248	:	:	:

Description

BnaCnng51620DBnaCnng51620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIR2]

Coordinates

chrLK035356:+:6180..13865

Molecular Weight (calculated)

53365.1 Da

IEP (calculated)

7.137

GRAVY (calculated)

-0.064

Length

483 amino acids

Sequence
(BLAST)

001: MVPTVHPSSS SCLTSEADEK YANVNWEELG FTLIPTDYIA GILNYGQGLF EGLKVYRTQV GRITLFRPEQ NALRMQMGAD RLCMTPPSVD QFVEAVKQTV
101: IANKKWVPSP GKGTLYIRPL LIGSGAVLGI ASAPEYMFKS EVANLFQNFC AMSVHQFGQS VQVIRSDNGT EFMVLTKYFQ KTGIIHQTSC VDTPQQNGRV
201: ERKHRHILNV ARACLFQSKL PITFWGESIL AAAHIINHTP SQVLDGKTPY EILHGSPPVY DLLCVFGCLA YAHRRARDKD KFVVYVSPVG NYHKGVSSGL
301: NLKVDHTYRR AHTGGTGGVK SCTNYSPVVK SLREAKSAGF SDVLFLDAAT GRNIEEVSTC NIFVVKENIL STPPISGTIL PGITRKSISE LAPDIGYQVQ
401: ERDVSVDELL EAEEVFCTGT AVVVRAVESV TFYETKIKYI TGENAFSTKL HVMLTNIQMG VVEDTKGWMV EVNDTIEIDT FLN

Best Arabidopsis Sequence Match ( AT1G10070.3 )
(BLAST)

001: MYVMKCSKDG EFTQGELSPY GNIQLSPSAG VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG
101: KGTLYIRPLL MGSGPILGLG PAPEYTFIVY ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE
201: EASSCNVFVV KGRTISTPAT NGTILEGITR KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV
301: GIQTGLIEDN KGWVTDIN

Arabidopsis Description

BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.