Factsheet for TraesCS4A01G059800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G313300.1
TraesCS2B01G332100.1
TraesCS2D01G311800.1
TraesCS6A01G198600.1
TraesCS6A01G274500.1
TraesCS6B01G230000.1
TraesCS6B01G302000.1
TraesCS6D01G184500.2
TraesCS6D01G254800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10070.1	TraesCS2A01G313300.1	AT1G54060.1	21798944
AT1G10070.1	TraesCS2B01G332100.1	AT1G54060.1	21798944
AT1G10070.1	TraesCS2D01G311800.1	AT1G54060.1	21798944
AT1G10070.1	TraesCS6A01G198600.1	AT1G54060.1	21798944
AT1G10070.1	TraesCS6B01G230000.1	AT1G54060.1	21798944
AT1G10070.1	TraesCS6D01G184500.2	AT1G54060.1	21798944
AT1G10070.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT1G10070.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT1G10070.1	TraesCS6D01G254800.1	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G236800.1	Wheat	mitochondrion	86.22	86.22
TraesCS4B01G235400.3	Wheat	mitochondrion	85.46	85.46
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	85.96	77.43
Os03t0231600-01	Rice	mitochondrion	78.2	75.18
OQU92960	Sorghum	mitochondrion	76.19	72.9
Zm00001d028303_P003	Maize	mitochondrion, plastid	75.94	72.14
GSMUA_Achr3P15170_001	Banana	mitochondrion	62.66	65.44
GSMUA_Achr8P26500_001	Banana	mitochondrion	62.41	65.18
CDY71328	Canola	cytosol, peroxisome, plastid	23.56	61.04
CDY12427	Canola	cytosol	25.31	60.12
CDY03587	Canola	cytosol	25.31	60.12
PGSC0003DMT400012703	Potato	mitochondrion	54.64	59.4
CDY45047	Canola	peroxisome	24.81	59.28
CDY22953	Canola	cytosol, peroxisome, plastid	14.79	58.42
Bra018831.1-P	Field mustard	cytosol	52.38	58.22
CDY28146	Canola	cytosol	51.88	57.66
CDY45046	Canola	mitochondrion	34.09	57.63
PGSC0003DMT400030117	Potato	cytosol, nucleus, peroxisome	24.31	57.4
KRH42003	Soybean	cytosol	48.12	57.31
CDY27928	Canola	cytosol	15.54	56.88
CDY03585	Canola	cytosol	51.13	56.82
KRH49895	Soybean	cytosol	51.13	56.82
KRH42010	Soybean	cytosol	50.63	56.74
AT1G50110.1	Thale cress	cytosol	50.63	56.74
Solyc07g021630.2.1	Tomato	plastid	54.39	56.66
PGSC0003DMT400012709	Potato	mitochondrion	53.63	56.61
TraesCS5A01G531200.1	Wheat	plastid	58.15	56.59
KRH49893	Soybean	cytosol	50.63	56.42
Bra019963.1-P	Field mustard	cytosol	54.39	56.36
CDY31050	Canola	mitochondrion	53.13	56.23
Bra031699.1-P	Field mustard	mitochondrion	53.38	56.05
Bra018463.1-P	Field mustard	mitochondrion	52.88	55.97
AT1G10070.1	Thale cress	mitochondrion	54.39	55.93
KRH61467	Soybean	mitochondrion	53.63	55.73
CDY69091	Canola	mitochondrion, peroxisome, plastid	25.31	55.49
Solyc04g077240.2.1	Tomato	mitochondrion	38.1	55.47
TraesCS1A01G208500.1	Wheat	plastid	56.89	55.37
AT1G50090.1	Thale cress	cytosol	50.88	55.31
CDY20661	Canola	mitochondrion	52.13	55.17
CDY31051	Canola	mitochondrion	39.85	54.64
CDY03586	Canola	plastid	49.12	54.44
KRH42008	Soybean	cytosol	50.38	54.32
Bra014235.1-P	Field mustard	plastid	48.87	54.17
CDY16426	Canola	cytosol	39.85	53.54
Bra039744.1-P	Field mustard	cytosol	38.1	53.52
Solyc12g088220.1.1	Tomato	plastid	50.88	53.42
Bra019964.1-P	Field mustard	cytosol	48.87	52.85
CDY22959	Canola	cytosol	41.1	52.23
Bra001761.1-P	Field mustard	cytosol	47.12	52.22
TraesCS2A01G407900.1	Wheat	plastid	53.63	52.2
CDY51693	Canola	cytosol	46.87	51.94
CDX82281	Canola	cytosol	46.62	51.67
CDY24619	Canola	cytosol	46.37	51.39
Bra022448.1-P	Field mustard	cytosol	46.37	51.39
CDY57927	Canola	mitochondrion	50.13	51.02
Bra018464.1-P	Field mustard	mitochondrion	43.36	50.14
CDY20662	Canola	mitochondrion	42.86	49.57
CDY63741	Canola	mitochondrion	43.11	49.14
CDY57926	Canola	cytosol	54.64	48.02
PGSC0003DMT400030118	Potato	mitochondrion	48.12	47.76
AT3G19710.1	Thale cress	cytosol	42.36	47.74
CDY63740	Canola	cytosol	53.88	47.46
KRH52160	Soybean	endoplasmic reticulum, plasma membrane, plastid	54.64	47.19
CDX99513	Canola	mitochondrion	6.77	44.26
AT1G10060.5	Thale cress	cytosol	49.62	41.25
CDY66609	Canola	cytosol	44.61	36.85
VIT_00s0558g00010.t01	Wine grape	plastid	9.02	26.28

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS
InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674	GO:GO:0003824	GO:GO:0004084
GO:GO:0008150	GO:GO:0008152	GO:GO:0009081	GO:GO:0009987	GO:GO:0016740	PFAM:PF01063
PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF6	SUPFAM:SSF56752	TIGRFAMs:TIGR01123
EnsemblPlantsGene:TraesCS4A01G059800	EnsemblPlants:TraesCS4A01G059800.1	TIGR:cd01557	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:+:56260475..56262485

Molecular Weight (calculated)

42995.4 Da

IEP (calculated)

6.535

GRAVY (calculated)

-0.188

Length

399 amino acids

Sequence
(BLAST)

001: MAVLSSARRL LPWGRAPAGG VSGGLRALLG TDGGGGRSLL PSRWKSSQPQ LDPVDRSDEE GGGDIDWDNL GFGLTPTDYM YVMRCSQEEG GFSRGELARY
101: GNIELSPSSG VLNYGQGLFE GLKAYRRADG PGYMLFRPEE NARRMQHGAG RMCMPAPSVE QFVHAVKQTV LANRRWVPPQ GKGALYLRPL LIGSGAILGL
201: APAPEYTFMI YAAPVGTYFK EGMAAINLLV EEEIHRAMPG GTGGVKTISN YAPVLKAQMD ARSKGFADVL YLDSVHKRYV EEASSCNLFV VKGGAVATPA
301: TEGTILPGVT RRSIIELARD SGYQVEERLV SIDDLVSADE VFCTGTAVGV TPVSTITYQG TRYEFRTGED TLSKKLYTAL TSIQMGLAED KKGWTVAVD

Best Arabidopsis Sequence Match ( AT1G10070.2 )
(BLAST)

001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN

Arabidopsis Description

BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.