Factsheet for AT1G10060.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31051	Canola	mitochondrion	52.92	87.29
Bra019964.1-P	Field mustard	cytosol	63.96	83.2
Bra018464.1-P	Field mustard	mitochondrion	56.88	79.13
CDY57927	Canola	mitochondrion	64.58	79.08
CDY20662	Canola	mitochondrion	56.67	78.84
CDY63741	Canola	mitochondrion	56.46	77.43
KRH61467	Soybean	mitochondrion	47.92	59.9
AT1G10070.1	Thale cress	mitochondrion	46.67	57.73
AT1G50090.1	Thale cress	cytosol	41.67	54.5
AT1G50110.1	Thale cress	cytosol	40.21	54.21
GSMUA_Achr3P15170_001	Banana	mitochondrion	42.08	52.88
GSMUA_Achr8P26500_001	Banana	mitochondrion	41.88	52.62
KRH52160	Soybean	endoplasmic reticulum, plasma membrane, plastid	49.17	51.08
TraesCS4A01G059800.1	Wheat	mitochondrion	41.25	49.62
TraesCS4B01G235400.3	Wheat	mitochondrion	40.83	49.12
TraesCS4D01G236800.1	Wheat	mitochondrion	40.83	49.12
Os03t0231600-01	Rice	mitochondrion	41.88	48.43
AT3G19710.1	Thale cress	cytosol	35.62	48.31
AT3G49680.1	Thale cress	plastid	41.46	48.18
OQU92960	Sorghum	mitochondrion	41.04	47.24
Zm00001d028303_P003	Maize	mitochondrion, plastid	40.42	46.19
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	42.08	45.6

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	EntrezGene:837542	UniProt:A0A1P8APA5
ProteinID:AAC34335.1	ProteinID:AEE28534.1	ProteinID:AEE28535.1	ProteinID:AEE28536.1	EMBL:AJ276123	EMBL:AK316768
ProteinID:ANM58499.1	ProteinID:ANM58500.1	ArrayExpress:AT1G10060	EnsemblPlantsGene:AT1G10060	RefSeq:AT1G10060	TAIR:AT1G10060
RefSeq:AT1G10060-TAIR-G	EnsemblPlants:AT1G10060.5	Symbol:ATBCAT-1	EMBL:AY054517	EMBL:AY128778	InterPro:Aminotrans_IV
InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	Unigene:At.5432	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674
GO:GO:0003824	GO:GO:0004084	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006552	GO:GO:0006574	GO:GO:0008150
GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009056	GO:GO:0009058	GO:GO:0009081
GO:GO:0009082	GO:GO:0009083	GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655
GO:GO:0052656	RefSeq:NP_001117257.1	RefSeq:NP_001320928.1	RefSeq:NP_001320929.1	RefSeq:NP_563859.1	RefSeq:NP_849629.1
PFAM:PF01063	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF5	SUPFAM:SSF56752	TIGRFAMs:TIGR01123
UniParc:UPI000848BB23	SEG:seg	:	:	:	:

Description

ATBCAT-1branched-chain amino acid transaminase 1 [Source:TAIR;Acc:AT1G10060]

Coordinates

chr1:+:3284073..3287292

Molecular Weight (calculated)

52999.6 Da

IEP (calculated)

7.488

GRAVY (calculated)

-0.046

Length

480 amino acids

Sequence
(BLAST)

001: MYSQSPIDIF EGIFVVTYKS WLRNLNTEKE NASNFPSSLY IFQPLSVSLP LCSFSNIFFR VGTTSLIIIF STPINKRYIL EFHFGAQTKL VQHSSYMALR
101: RCLPQYSTTS SYLSKIWGFR MHGTKAAASV VEEHVSGAER EDEEYADVDW DNLGFSLVRT DFMFATKSCR DGNFEQGYLS RYGNIELNPA AGILNYGQGL
201: IEGMKAYRGE DGRVLLFRPE LNAMRMKIGA ERMCMHSPSV HQFIEGVKQT VLANRRWVPP PGKGSLYLRP LLFGSGASLG VAAASEYTFL VFGSPVQNYF
301: KEGTAALNLY VEEVIPRAYL GGTGGVKAIS NYGPVLEVMR RAKSRGFSDV LYLDADTGKN IEEVSAANIF LVKGNTIVTP ATSGTILGGI TRKSIIEIAL
401: DLGYKVEERS VPVEELKEAE EVFCTGTAAG VASVGSITFK NTRTEYKVGD GIVTQQLRSI LVGIQTGSIQ DTKDWVLQIA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.