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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G313300.1
TraesCS2B01G332100.1
TraesCS2D01G311800.1
TraesCS6A01G198600.1
TraesCS6A01G274500.1
TraesCS6B01G230000.1
TraesCS6B01G302000.1
TraesCS6D01G184500.2
TraesCS6D01G254800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G10070.1 TraesCS2A01G313300.1 AT1G54060.1 21798944
AT1G10070.1 TraesCS2B01G332100.1 AT1G54060.1 21798944
AT1G10070.1 TraesCS2D01G311800.1 AT1G54060.1 21798944
AT1G10070.1 TraesCS6A01G198600.1 AT1G54060.1 21798944
AT1G10070.1 TraesCS6B01G230000.1 AT1G54060.1 21798944
AT1G10070.1 TraesCS6D01G184500.2 AT1G54060.1 21798944
AT1G10070.1 TraesCS6A01G274500.1 AT3G27960.1 21798944
AT1G10070.1 TraesCS6B01G302000.1 AT3G27960.1 21798944
AT1G10070.1 TraesCS6D01G254800.1 AT3G27960.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G235400.3 Wheat mitochondrion 96.24 96.24
TraesCS4A01G059800.1 Wheat mitochondrion 86.22 86.22
HORVU0Hr1G008950.3 Barley cytosol, mitochondrion 83.71 75.39
Os03t0231600-01 Rice mitochondrion 74.44 71.57
Zm00001d028303_P003 Maize mitochondrion, plastid 73.68 70.0
OQU92960 Sorghum mitochondrion 72.43 69.3
GSMUA_Achr3P15170_001 Banana mitochondrion 63.16 65.97
GSMUA_Achr8P26500_001 Banana mitochondrion 62.41 65.18
CDY71328 Canola cytosol, peroxisome, plastid 24.31 62.99
CDY12427 Canola cytosol 25.31 60.12
CDY03587 Canola cytosol 25.31 60.12
PGSC0003DMT400012703 Potato mitochondrion 54.89 59.67
CDY45047 Canola peroxisome 24.81 59.28
CDY27928 Canola cytosol 16.04 58.72
Bra018831.1-P Field mustard cytosol 52.63 58.5
Solyc07g021630.2.1 Tomato plastid 56.14 58.49
CDY22953 Canola cytosol, peroxisome, plastid 14.79 58.42
KRH61467 Soybean mitochondrion 55.89 58.07
KRH49895 Soybean cytosol 52.13 57.94
KRH42010 Soybean cytosol 51.63 57.87
PGSC0003DMT400012709 Potato mitochondrion 54.64 57.67
CDY28146 Canola cytosol 51.88 57.66
CDY45046 Canola mitochondrion 34.09 57.63
KRH49893 Soybean cytosol 51.63 57.54
PGSC0003DMT400030117 Potato cytosol, nucleus, peroxisome 24.31 57.4
KRH42003 Soybean cytosol 48.12 57.31
AT1G50110.1 Thale cress cytosol 51.13 57.3
CDY31050 Canola mitochondrion 54.14 57.29
Bra018463.1-P Field mustard mitochondrion 53.88 57.03
AT1G10070.1 Thale cress mitochondrion 55.39 56.96
Solyc04g077240.2.1 Tomato mitochondrion 39.1 56.93
CDY03585 Canola cytosol 51.13 56.82
Bra019963.1-P Field mustard cytosol 54.64 56.62
TraesCS4D01G356200.1 Wheat plastid 57.89 56.34
CDY20661 Canola mitochondrion 53.13 56.23
Bra031699.1-P Field mustard mitochondrion 53.13 55.79
CDY03586 Canola plastid 50.13 55.56
CDY69091 Canola mitochondrion, peroxisome, plastid 25.31 55.49
AT1G50090.1 Thale cress cytosol 50.88 55.31
Bra014235.1-P Field mustard plastid 49.87 55.28
KRH42008 Soybean cytosol 51.13 55.14
TraesCS1D01G211700.1 Wheat plastid 56.64 55.12
CDY31051 Canola mitochondrion 40.1 54.98
Solyc12g088220.1.1 Tomato plastid 51.88 54.47
CDY16426 Canola cytosol 40.35 54.21
Bra039744.1-P Field mustard cytosol 38.35 53.87
Bra001761.1-P Field mustard cytosol 47.87 53.06
CDY22959 Canola cytosol 41.6 52.87
CDY51693 Canola cytosol 47.62 52.78
CDX82281 Canola cytosol 47.62 52.78
Bra019964.1-P Field mustard cytosol 48.37 52.3
Bra022448.1-P Field mustard cytosol 47.12 52.22
CDY24619 Canola cytosol 46.87 51.94
TraesCS2D01G405200.1 Wheat plastid 52.13 50.73
Bra018464.1-P Field mustard mitochondrion 42.86 49.57
CDY57927 Canola mitochondrion 48.62 49.49
CDY20662 Canola mitochondrion 42.61 49.28
AT3G19710.1 Thale cress cytosol 43.36 48.87
CDY63740 Canola cytosol 55.14 48.57
PGSC0003DMT400030118 Potato mitochondrion 48.87 48.51
CDY57926 Canola cytosol 55.14 48.46
KRH52160 Soybean endoplasmic reticulum, plasma membrane, plastid 55.89 48.27
CDY63741 Canola mitochondrion 41.6 47.43
CDX99513 Canola mitochondrion 6.77 44.26
AT1G10060.5 Thale cress cytosol 49.12 40.83
CDY66609 Canola cytosol 44.86 37.06
VIT_00s0558g00010.t01 Wine grape plastid 9.77 28.47
Protein Annotations
KEGG:00270+2.6.1.42KEGG:00280+2.6.1.42KEGG:00290+2.6.1.42KEGG:00770+2.6.1.42KEGG:00966+2.6.1.42Gene3D:3.20.10.10
Gene3D:3.30.470.10MapMan:4.1.2.2.8.6MapMan:4.1.3.2.4MapMan:4.2.7.1InterPro:Aminotrans_IVInterPro:Aminotrans_IV_CS
InterPro:Aminotransferase-likeInterPro:BCAT_familyInterPro:B_amino_transIIGO:GO:0003674GO:GO:0003824GO:GO:0004084
GO:GO:0008150GO:GO:0008152GO:GO:0009081GO:GO:0009987GO:GO:0016740PFAM:PF01063
PIRSF:PIRSF006468ScanProsite:PS00770PANTHER:PTHR42825PANTHER:PTHR42825:SF6SUPFAM:SSF56752TIGRFAMs:TIGR01123
EnsemblPlantsGene:TraesCS4D01G236800EnsemblPlants:TraesCS4D01G236800.1TIGR:cd01557SEG:seg::
Description
No Description!
Coordinates
chr4D:+:398903051..398905064
Molecular Weight (calculated)
42973.3 Da
IEP (calculated)
6.534
GRAVY (calculated)
-0.199
Length
399 amino acids
Sequence
(BLAST)
001: MDVLSSAKRA LPWGRTSAGG VIGGLRALLG TDGGGGRSLL PSRWKSSQPQ LDPVDRSDEE GGGDIDWDNL GFGLTPTDYM YVMRCTQEEG GFSRGELARY
101: GNIELSPSSG VLNYGQGLFE GLKAYRRADG PGYTLFRPEE NARRMQHGAG RMCMPSPSVE QFVHAVKQTV LANKRWVPPQ GKGALYLRPL LIGSGAILGL
201: APAPEYTFMI YAAPVGTYFK EGMAAINLLV EEEIHRAMPG GTGGVKTISN YAPVLKAQMD ARSKGFADVL YLDSVHKRYV EEASSCNLFV VKGGAVATPA
301: TAGTILPGVT RRSIIELARD SGYQVEERLV SIDDLISADE VFCTGTAVGV TPVSTITYQG TRYEFRTGED TLSKKLYTTL TSIQMGLAED KKGWTVAVD
Best Arabidopsis Sequence Match ( AT1G10070.2 )
(BLAST)
001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN
Arabidopsis Description
BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.