Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 1
- mitochondrion 8
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400001405 | |
| PGSC0003DMT400088401 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G10070.1 | PGSC0003DMT400088401 | AT1G54060.1 | 21798944 |
| AT1G10070.1 | PGSC0003DMT400001405 | AT3G27960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g088220.1.1 | Tomato | plastid | 77.86 | 82.37 |
| PGSC0003DMT400012703 | Potato | mitochondrion | 59.2 | 64.85 |
| PGSC0003DMT400012709 | Potato | mitochondrion | 59.95 | 63.76 |
| PGSC0003DMT400030117 | Potato | cytosol, nucleus, peroxisome | 25.62 | 60.95 |
| VIT_18s0001g08450.t01 | Wine grape | mitochondrion | 52.99 | 55.04 |
| VIT_18s0001g08430.t01 | Wine grape | mitochondrion | 52.99 | 55.04 |
| AT1G10070.1 | Thale cress | mitochondrion | 49.75 | 51.55 |
| Bra019963.1-P | Field mustard | cytosol | 49.25 | 51.43 |
| Bra018463.1-P | Field mustard | mitochondrion | 47.76 | 50.93 |
| CDY31050 | Canola | mitochondrion | 47.76 | 50.93 |
| Bra031699.1-P | Field mustard | mitochondrion | 47.51 | 50.26 |
| CDY20661 | Canola | mitochondrion | 47.01 | 50.13 |
| GSMUA_Achr3P15170_001 | Banana | mitochondrion | 47.26 | 49.74 |
| TraesCS4B01G235400.3 | Wheat | mitochondrion | 49.25 | 49.62 |
| TraesCS4D01G236800.1 | Wheat | mitochondrion | 48.51 | 48.87 |
| GSMUA_Achr8P26500_001 | Banana | mitochondrion | 46.27 | 48.69 |
| TraesCS4A01G059800.1 | Wheat | mitochondrion | 47.76 | 48.12 |
| Os03t0231600-01 | Rice | mitochondrion | 48.26 | 46.75 |
| PGSC0003DMT400055202 | Potato | plastid | 48.01 | 46.28 |
| PGSC0003DMT400044068 | Potato | plastid | 47.76 | 45.82 |
| Zm00001d028303_P003 | Maize | mitochondrion, plastid | 47.76 | 45.71 |
| OQU92960 | Sorghum | mitochondrion | 47.26 | 45.56 |
| CDY57926 | Canola | cytosol | 49.75 | 44.05 |
| CDY63740 | Canola | cytosol | 49.5 | 43.93 |
| HORVU0Hr1G008950.3 | Barley | cytosol, mitochondrion | 48.26 | 43.79 |
Protein Annotations
| KEGG:00270+2.6.1.42 | KEGG:00280+2.6.1.42 | KEGG:00290+2.6.1.42 | KEGG:00770+2.6.1.42 | KEGG:00966+2.6.1.42 | EntrezGene:102594516 |
| Gene3D:3.20.10.10 | Gene3D:3.30.470.10 | MapMan:4.1.2.2.8.6 | MapMan:4.1.3.2.4 | MapMan:4.2.7.1 | InterPro:Aminotrans_IV |
| InterPro:Aminotrans_IV_CS | InterPro:Aminotransferase-like | InterPro:BCAT_family | InterPro:B_amino_transII | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004084 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008483 | GO:GO:0008652 | GO:GO:0009058 |
| GO:GO:0009081 | GO:GO:0009082 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0052654 | GO:GO:0052655 |
| GO:GO:0052656 | UniProt:M1ATS3 | PFAM:PF01063 | EnsemblPlantsGene:PGSC0003DMG402011540 | PGSC:PGSC0003DMG402011540 | EnsemblPlants:PGSC0003DMT400030118 |
| PIRSF:PIRSF006468 | ScanProsite:PS00770 | PANTHER:PTHR42825 | PANTHER:PTHR42825:SF5 | SUPFAM:SSF56752 | TIGRFAMs:TIGR01123 |
| UniParc:UPI0002958F42 | SEG:seg | : | : | : | : |
Description
Branched-chain-amino-acid aminotransferase [Source:PGSC_GENE;Acc:PGSC0003DMG402011540]
Coordinates
chr12:+:56081187..56089457
Molecular Weight (calculated)
44498.1 Da
IEP (calculated)
7.008
GRAVY (calculated)
-0.289
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIQRASCFH RALLTSLEKV GPRYFTAPAQ TSAQPSTYRD YESRDIFDWD NLGFKLIQTD YMFMTRSSQN GNFEKGKLNP YGNIELSPSA GVLNYGQGLI
101: EGTKAYRVDD GRIFLFRPQE SGIRMQIGAK RMCMPSPSIQ QFVDAVKLTT IANRRWIPPA GKGSLYIRPL LIGNGPILGI APAPEYTFIV YACPVGNYLR
201: NGTQPLTLYV EEEHHRASQG GAGGVKAITN YAPVIKAIQK AKERGYSDVL YLDSVNKKYI EEVSASNIFL VKGKNISTPV ASGTILEGVT RKSIIDIAHD
301: LGYQVEERLI EADELFSADE VFCTGTALGV APVGSITYKN KSPMNVIHMT KSPSLNSNEY NMDEKAFCWA DTDTDTDTER RKLEAPIRSD TPIVLAINDE
401: CG
101: EGTKAYRVDD GRIFLFRPQE SGIRMQIGAK RMCMPSPSIQ QFVDAVKLTT IANRRWIPPA GKGSLYIRPL LIGNGPILGI APAPEYTFIV YACPVGNYLR
201: NGTQPLTLYV EEEHHRASQG GAGGVKAITN YAPVIKAIQK AKERGYSDVL YLDSVNKKYI EEVSASNIFL VKGKNISTPV ASGTILEGVT RKSIIDIAHD
301: LGYQVEERLI EADELFSADE VFCTGTALGV APVGSITYKN KSPMNVIHMT KSPSLNSNEY NMDEKAFCWA DTDTDTDTER RKLEAPIRSD TPIVLAINDE
401: CG
001: MALRRCLPQY STTSSYLSKI WGFRMHGTKA AASVVEEHVS GAEREDEEYA DVDWDNLGFS LVRTDFMFAT KSCRDGNFEQ GYLSRYGNIE LNPAAGILNY
101: GQGLIEGMKA YRGEDGRVLL FRPELNAMRM KIGAERMCMH SPSVHQFIEG VKQTVLANRR WVPPPGKGSL YLRPLLFGSG ASLGVAAASE YTFLVFGSPV
201: QNYFKEGTAA LNLYVEEVIP RAYLGGTGGV KAISNYGPVL EVMRRAKSRG FSDVLYLDAD TGKNIEEVSA ANIFLVKGNT IVTPATSGTI LGGITRKSII
301: EIALDLGYKV EERSVPVEEL KEAEEVFCTG TAAGVASVGS ITFKNTRSLL PLWIHVYICL EFYIYLLINN LQD
101: GQGLIEGMKA YRGEDGRVLL FRPELNAMRM KIGAERMCMH SPSVHQFIEG VKQTVLANRR WVPPPGKGSL YLRPLLFGSG ASLGVAAASE YTFLVFGSPV
201: QNYFKEGTAA LNLYVEEVIP RAYLGGTGGV KAISNYGPVL EVMRRAKSRG FSDVLYLDAD TGKNIEEVSA ANIFLVKGNT IVTPATSGTI LGGITRKSII
301: EIALDLGYKV EERSVPVEEL KEAEEVFCTG TAAGVASVGS ITFKNTRSLL PLWIHVYICL EFYIYLLINN LQD
Arabidopsis Description
ATBCAT-1branched-chain amino acid transaminase 1 [Source:TAIR;Acc:AT1G10060]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.