Factsheet for HORVU0Hr1G008950.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G077940.1
HORVU6Hr1G050140.1
HORVU6Hr1G069310.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10070.1	HORVU2Hr1G077940.1	AT1G54060.1	21798944
AT1G10070.1	HORVU6Hr1G050140.1	AT1G54060.1	21798944
AT1G10070.1	HORVU6Hr1G069310.1	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G059800.1	Wheat	mitochondrion	77.43	85.96
TraesCS4D01G236800.1	Wheat	mitochondrion	75.39	83.71
TraesCS4B01G235400.3	Wheat	mitochondrion	74.94	83.21
Os03t0231600-01	Rice	mitochondrion	71.11	75.9
Zm00001d028303_P003	Maize	mitochondrion, plastid	69.07	72.86
OQU92960	Sorghum	mitochondrion	66.14	70.26
GSMUA_Achr3P15170_001	Banana	mitochondrion	58.47	67.8
GSMUA_Achr8P26500_001	Banana	mitochondrion	56.88	65.97
CDY71328	Canola	cytosol, peroxisome, plastid	21.67	62.34
CDY03587	Canola	cytosol	23.02	60.71
CDY12427	Canola	cytosol	23.02	60.71
PGSC0003DMT400012703	Potato	mitochondrion	50.11	60.49
CDY45047	Canola	peroxisome	22.57	59.88
CDY45046	Canola	mitochondrion	31.6	59.32
Bra018831.1-P	Field mustard	cytosol	47.86	59.05
CDY27928	Canola	cytosol	14.45	58.72
CDY22953	Canola	cytosol, peroxisome, plastid	13.32	58.42
CDY28146	Canola	cytosol	47.18	58.22
AT1G50110.1	Thale cress	cytosol	46.73	58.15
KRH42010	Soybean	cytosol	46.5	57.87
CDY31050	Canola	mitochondrion	49.21	57.82
AT1G10070.1	Thale cress	mitochondrion	50.56	57.73
Bra019963.1-P	Field mustard	cytosol	50.11	57.66
CDY03585	Canola	cytosol	46.73	57.66
KRH42003	Soybean	cytosol	43.57	57.61
Bra018463.1-P	Field mustard	mitochondrion	48.98	57.56
KRH49895	Soybean	cytosol	46.5	57.38
PGSC0003DMT400012709	Potato	mitochondrion	48.53	56.88
PGSC0003DMT400030117	Potato	cytosol, nucleus, peroxisome	21.67	56.8
KRH61467	Soybean	mitochondrion	49.21	56.77
CDY20661	Canola	mitochondrion	48.31	56.76
KRH49893	Soybean	cytosol	45.82	56.7
Solyc07g021630.2.1	Tomato	plastid	48.98	56.66
CDY69091	Canola	mitochondrion, peroxisome, plastid	23.25	56.59
Bra031699.1-P	Field mustard	mitochondrion	48.31	56.32
Solyc04g077240.2.1	Tomato	mitochondrion	34.76	56.2
HORVU1Hr1G053320.7	Barley	plastid	52.14	56.2
AT1G50090.1	Thale cress	cytosol	46.5	56.13
CDY03586	Canola	plastid	45.37	55.83
Bra014235.1-P	Field mustard	plastid	45.15	55.56
KRH42008	Soybean	cytosol	46.05	55.14
CDY31051	Canola	mitochondrion	36.12	54.98
CDY16426	Canola	cytosol	36.79	54.88
Bra039744.1-P	Field mustard	cytosol	34.99	54.58
HORVU1Hr1G002790.1	Barley	endoplasmic reticulum	31.15	54.33
Solyc12g088220.1.1	Tomato	plastid	46.5	54.21
Bra001761.1-P	Field mustard	cytosol	43.79	53.89
CDY22959	Canola	cytosol	38.15	53.82
CDY51693	Canola	cytosol	43.57	53.61
Bra019964.1-P	Field mustard	cytosol	44.47	53.39
CDX82281	Canola	cytosol	43.34	53.33
Bra022448.1-P	Field mustard	cytosol	43.12	53.06
CDY24619	Canola	cytosol	42.89	52.78
Bra018464.1-P	Field mustard	mitochondrion	39.5	50.72
CDY57927	Canola	mitochondrion	44.7	50.51
AT3G19710.1	Thale cress	cytosol	39.95	50.0
CDY20662	Canola	mitochondrion	38.37	49.28
CDY63740	Canola	cytosol	50.34	49.23
CDY57926	Canola	cytosol	50.34	49.12
HORVU4Hr1G087100.5	Barley	mitochondrion	52.82	48.75
CDY63741	Canola	mitochondrion	38.15	48.29
KRH52160	Soybean	endoplasmic reticulum, plasma membrane, plastid	50.34	48.27
PGSC0003DMT400030118	Potato	mitochondrion	43.79	48.26
CDX99513	Canola	mitochondrion	6.09	44.26
HORVU2Hr1G096380.2	Barley	plastid	48.08	44.1
AT1G10060.5	Thale cress	cytosol	45.6	42.08
CDY66609	Canola	cytosol	40.63	37.27
VIT_00s0558g00010.t01	Wine grape	plastid	8.13	26.28

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	UniProt:A0A287DY83	InterPro:Aminotrans_IV
InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674	GO:GO:0003824
GO:GO:0004084	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009058
GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655
GO:GO:0052656	EnsemblPlantsGene:HORVU0Hr1G008950	EnsemblPlants:HORVU0Hr1G008950.3	PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770
PANTHER:PTHR42825	PANTHER:PTHR42825:SF6	SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI000B462BCD	SEG:seg

Description

Branched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A287DY83]

Coordinates

chrchrUn:-:53571623..53573866

Molecular Weight (calculated)

48470.4 Da

IEP (calculated)

8.259

GRAVY (calculated)

-0.143

Length

443 amino acids

Sequence
(BLAST)

001: ALLSCVTVEI PIYLHKHHKP WPPGLAFLFI HLVSVERSIS PGRLRSIYIS VSKMLCRPAS MRSIGTHSRR LLCVQDGGGR SLLPSRWKSS LPQLDPVDRS
101: DEESGGDIDW DNLGFGLTPT DYMYVMRCSR EEGGFSRGEL ARYGNIELSP SSGVLNYGQG LFEGLKAYRR SDGAGYMLFR PEENARRMQH GAGRMCMPSP
201: SVEQFVHAVK QTVLANRRWV PPQGKGALYI RPLLIGSGAI LGLAPAPEYT FMIYAAPVGT YFKEGMAAIN LLVEEEIHRA MPGGTGGVKT ISNYAPVLKP
301: QMDAKSKGFA DVLYLDAVHK RYVEEASSCN LFVVKGGAVA TPATTAGTIL PGVTRRSIIE LARDDGYQVE ERLVSIDDLV GADEVFCTGT AVGVTPVSTI
401: TYQGTRHEFR TGEDTLSRKL YTTLTSIQMG LAEDKKGWTV AID

Best Arabidopsis Sequence Match ( AT1G10070.1 )
(BLAST)

001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN

Arabidopsis Description

BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.