Factsheet for TraesCS4B01G235400.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G313300.1
TraesCS2B01G332100.1
TraesCS2D01G311800.1
TraesCS6A01G198600.1
TraesCS6A01G274500.1
TraesCS6B01G230000.1
TraesCS6B01G302000.1
TraesCS6D01G184500.2
TraesCS6D01G254800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10070.1	TraesCS2A01G313300.1	AT1G54060.1	21798944
AT1G10070.1	TraesCS2B01G332100.1	AT1G54060.1	21798944
AT1G10070.1	TraesCS2D01G311800.1	AT1G54060.1	21798944
AT1G10070.1	TraesCS6A01G198600.1	AT1G54060.1	21798944
AT1G10070.1	TraesCS6B01G230000.1	AT1G54060.1	21798944
AT1G10070.1	TraesCS6D01G184500.2	AT1G54060.1	21798944
AT1G10070.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT1G10070.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT1G10070.1	TraesCS6D01G254800.1	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G236800.1	Wheat	mitochondrion	96.24	96.24
TraesCS4A01G059800.1	Wheat	mitochondrion	85.46	85.46
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	83.21	74.94
Os03t0231600-01	Rice	mitochondrion	73.68	70.84
Zm00001d028303_P003	Maize	mitochondrion, plastid	72.68	69.05
OQU92960	Sorghum	mitochondrion	71.18	68.11
GSMUA_Achr3P15170_001	Banana	mitochondrion	62.91	65.71
GSMUA_Achr8P26500_001	Banana	mitochondrion	61.65	64.4
CDY71328	Canola	cytosol, peroxisome, plastid	23.81	61.69
CDY12427	Canola	cytosol	25.56	60.71
CDY03587	Canola	cytosol	25.56	60.71
CDY45047	Canola	peroxisome	25.06	59.88
PGSC0003DMT400012703	Potato	mitochondrion	54.89	59.67
CDY27928	Canola	cytosol	16.04	58.72
PGSC0003DMT400030117	Potato	cytosol, nucleus, peroxisome	24.81	58.58
Solyc07g021630.2.1	Tomato	plastid	55.89	58.22
KRH49895	Soybean	cytosol	52.38	58.22
Bra018831.1-P	Field mustard	cytosol	51.88	57.66
KRH42010	Soybean	cytosol	51.38	57.58
CDY22953	Canola	cytosol, peroxisome, plastid	14.54	57.43
PGSC0003DMT400012709	Potato	mitochondrion	54.39	57.41
KRH42003	Soybean	cytosol	48.12	57.31
CDY31050	Canola	mitochondrion	54.14	57.29
CDY45046	Canola	mitochondrion	33.83	57.2
Bra018463.1-P	Field mustard	mitochondrion	53.88	57.03
KRH49893	Soybean	cytosol	51.13	56.98
AT1G10070.1	Thale cress	mitochondrion	55.39	56.96
CDY28146	Canola	cytosol	51.13	56.82
KRH61467	Soybean	mitochondrion	54.64	56.77
Bra019963.1-P	Field mustard	cytosol	54.64	56.62
Solyc04g077240.2.1	Tomato	mitochondrion	38.85	56.57
AT1G50110.1	Thale cress	cytosol	50.38	56.46
TraesCS4B01G363000.1	Wheat	plastid	57.89	56.34
CDY20661	Canola	mitochondrion	53.13	56.23
CDY03585	Canola	cytosol	50.38	55.99
Bra031699.1-P	Field mustard	mitochondrion	53.13	55.79
TraesCS1B01G222500.1	Wheat	plastid	56.89	55.37
AT1G50090.1	Thale cress	cytosol	50.63	55.04
KRH42008	Soybean	cytosol	50.88	54.86
Solyc12g088220.1.1	Tomato	plastid	52.13	54.74
CDY31051	Canola	mitochondrion	39.85	54.64
CDY03586	Canola	plastid	49.12	54.44
CDY69091	Canola	mitochondrion, peroxisome, plastid	24.81	54.4
Bra014235.1-P	Field mustard	plastid	48.87	54.17
CDY16426	Canola	cytosol	39.6	53.2
Bra039744.1-P	Field mustard	cytosol	37.59	52.82
CDY22959	Canola	cytosol	41.35	52.55
Bra001761.1-P	Field mustard	cytosol	47.37	52.5
Bra019964.1-P	Field mustard	cytosol	48.37	52.3
CDX82281	Canola	cytosol	47.12	52.22
CDY51693	Canola	cytosol	46.87	51.94
TraesCS2B01G426100.1	Wheat	plastid	52.88	51.46
Bra022448.1-P	Field mustard	cytosol	46.37	51.39
CDY24619	Canola	cytosol	46.12	51.11
CDY57927	Canola	mitochondrion	48.62	49.49
Bra018464.1-P	Field mustard	mitochondrion	42.61	49.28
PGSC0003DMT400030118	Potato	mitochondrion	49.62	49.25
CDY20662	Canola	mitochondrion	42.11	48.7
CDY63740	Canola	cytosol	54.89	48.34
CDY57926	Canola	cytosol	54.89	48.24
AT3G19710.1	Thale cress	cytosol	42.36	47.74
CDY63741	Canola	mitochondrion	41.6	47.43
KRH52160	Soybean	endoplasmic reticulum, plasma membrane, plastid	54.89	47.4
CDX99513	Canola	mitochondrion	6.77	44.26
AT1G10060.5	Thale cress	cytosol	49.12	40.83
CDY66609	Canola	cytosol	44.11	36.44
VIT_00s0558g00010.t01	Wine grape	plastid	10.03	29.2

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS
InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674	GO:GO:0003824	GO:GO:0004084
GO:GO:0008150	GO:GO:0008152	GO:GO:0009081	GO:GO:0009987	GO:GO:0016740	PFAM:PF01063
PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF6	SUPFAM:SSF56752	TIGRFAMs:TIGR01123
EnsemblPlantsGene:TraesCS4B01G235400	EnsemblPlants:TraesCS4B01G235400.3	TIGR:cd01557	SEG:seg	:	:

Description

No Description!

Coordinates

chr4B:+:491797115..491799106

Molecular Weight (calculated)

43005.4 Da

IEP (calculated)

6.683

GRAVY (calculated)

-0.198

Length

399 amino acids

Sequence
(BLAST)

001: MAVLSSAKRL LPWGRASAGG VSGGLRALLG TDGGGGRSLL PSRWKSSQPQ LDPVDRSDEE GGGDIDWDNL GFGLTPTDYM YVMRCSQEEG GFSRGELARY
101: GNIELSPSSG VLNYGQGLFE GLKAHRRADG PGYMLFRPEE NARRMQHGAG RMCMPSPSVE QFVHAVKQTV LANRRWVPPQ GKGALYIRPL LIGSGAILGL
201: APAPEYTFMI YAAPVGTYFK EGMAAINLLV EEEIHRAMPG GTGGVKSISN YAPVLKAQMD ARSKGFADVL YLDSVHKRYV EEASSCNLFV VKGGAIATPA
301: TEGTILPGVT RRSIIELARD SGYQVEERLV SIDDLISADE VFCTGTAVGI TPVSTITYQG TRYEFRAGED TLSKKLYTTL TSIQMGLAED KKGWTVTVD

Best Arabidopsis Sequence Match ( AT1G10070.2 )
(BLAST)

001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN

Arabidopsis Description

BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.