Factsheet for Bra019963.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra014370.1-P
Bra025315.1-P
Bra030909.1-P
Bra037960.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10070.1	Bra014370.1-P	AT1G54060.1	21798944
AT1G10070.1	Bra030909.1-P	AT1G54060.1	21798944
AT1G10070.1	Bra037960.1-P	AT1G54060.1	21798944
AT1G10070.1	Bra025315.1-P	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018463.1-P	Field mustard	mitochondrion	84.68	86.47
Bra031699.1-P	Field mustard	mitochondrion	82.86	83.95
AT1G10070.1	Thale cress	mitochondrion	84.42	83.76
CDY57926	Canola	cytosol	92.73	78.63
VIT_18s0001g08430.t01	Wine grape	mitochondrion	65.19	64.86
VIT_18s0001g08450.t01	Wine grape	mitochondrion	63.64	63.31
PGSC0003DMT400012703	Potato	mitochondrion	60.26	63.22
PGSC0003DMT400030117	Potato	cytosol, nucleus, peroxisome	27.53	62.72
PGSC0003DMT400012709	Potato	mitochondrion	60.52	61.64
Solyc07g021630.2.1	Tomato	plastid	60.78	61.1
Solyc04g077240.2.1	Tomato	mitochondrion	42.34	59.49
Bra019964.1-P	Field mustard	cytosol	56.62	59.08
GSMUA_Achr3P15170_001	Banana	mitochondrion	58.44	58.9
Bra018464.1-P	Field mustard	mitochondrion	51.43	57.39
Solyc12g088220.1.1	Tomato	plastid	56.36	57.11
GSMUA_Achr8P26500_001	Banana	mitochondrion	56.36	56.81
Bra018831.1-P	Field mustard	cytosol	52.73	56.55
Bra014235.1-P	Field mustard	plastid	51.69	55.28
TraesCS4B01G235400.3	Wheat	mitochondrion	56.62	54.64
TraesCS4D01G236800.1	Wheat	mitochondrion	56.62	54.64
TraesCS4A01G059800.1	Wheat	mitochondrion	56.36	54.39
Bra017964.1-P	Field mustard	plastid	57.4	53.9
Os03t0231600-01	Rice	mitochondrion	57.66	53.49
Bra029966.1-P	Field mustard	plastid	56.62	52.66
OQU92960	Sorghum	mitochondrion	56.88	52.52
Bra039744.1-P	Field mustard	cytosol	38.7	52.46
Zm00001d028303_P003	Maize	mitochondrion, plastid	56.1	51.43
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	57.66	50.11
Bra022448.1-P	Field mustard	cytosol	46.23	49.44
PGSC0003DMT400030118	Potato	mitochondrion	51.43	49.25
Bra001761.1-P	Field mustard	cytosol	45.97	49.17

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS
InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	EnsemblPlantsGene:Bra019963	EnsemblPlants:Bra019963.1	EnsemblPlants:Bra019963.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004084	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0008652	GO:GO:0009058	GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0016740
GO:GO:0052654	GO:GO:0052655	GO:GO:0052656	UniProt:M4DTX0	PFAM:PF01063	PIRSF:PIRSF006468
ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF5	SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI000253E995

Description

AT1G10070 (E=2e-193) ATBCAT-2 | ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino-acid transaminase/ catalytic

Coordinates

chrA06:+:3483928..3486812

Molecular Weight (calculated)

42326.4 Da

IEP (calculated)

5.602

GRAVY (calculated)

-0.317

Length

385 amino acids

Sequence
(BLAST)

001: MVMDEDVGKT NDVERTQRTE LQSFSKYNAQ AASALQEERK KPTYQDDNEY ADMDWDNLGF GLTPADYMYV MKCSKDGEFT KGELSRFGNI QLSPSAGVLN
101: YGQAIYEGTK VYRKENGKLL LFRPDHNAVR MQLGAERMLM PSPSVDQFVD AVKQTAFANK RWVPPSGKGS LYIRPLLMGS GPVLGLAPAP EYTFIIYASP
201: VGNYFKEGTA ALNLYVEEEY VRAAPGGAGG VKSITNYAPV LKALSRAKSR GFSDILYLDA VKKKYLEEAS SCNVFVVKGR TISTPATNGT ILEGITRKSV
301: MEIASDQGYK VVEKAVHVDE VMDADEVFCT GTAVGVAPVG TITYQDKRIR YETGDESVCQ KLRSVLVGIQ TGTIEDTKGW VTCIN

Best Arabidopsis Sequence Match ( AT1G10070.2 )
(BLAST)

001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN

Arabidopsis Description

BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.