Factsheet for Bra018831.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69091	Canola	mitochondrion, peroxisome, plastid	49.03	96.7
AT1G50110.1	Thale cress	cytosol	87.74	88.48
Bra014235.1-P	Field mustard	plastid	81.62	81.39
Bra039744.1-P	Field mustard	cytosol	58.5	73.94
KRH42010	Soybean	cytosol	62.67	63.2
KRH49893	Soybean	cytosol	62.95	63.13
Bra001761.1-P	Field mustard	cytosol	63.23	63.06
Bra022448.1-P	Field mustard	cytosol	62.95	62.78
KRH49895	Soybean	cytosol	61.84	61.84
KRH42008	Soybean	cytosol	60.72	58.92
KRH42003	Soybean	cytosol	52.37	56.12
Bra018463.1-P	Field mustard	mitochondrion	55.71	53.05
Bra031699.1-P	Field mustard	mitochondrion	55.99	52.89
Bra019963.1-P	Field mustard	cytosol	56.55	52.73
TraesCS4D01G236800.1	Wheat	mitochondrion	58.5	52.63
TraesCS4A01G059800.1	Wheat	mitochondrion	58.22	52.38
GSMUA_Achr3P15170_001	Banana	mitochondrion	55.71	52.36
TraesCS4B01G235400.3	Wheat	mitochondrion	57.66	51.88
Os03t0231600-01	Rice	mitochondrion	59.61	51.57
Bra019964.1-P	Field mustard	cytosol	52.92	51.49
GSMUA_Achr8P26500_001	Banana	mitochondrion	54.6	51.31
Bra018464.1-P	Field mustard	mitochondrion	49.03	51.01
OQU92960	Sorghum	mitochondrion	57.1	49.16
Bra017964.1-P	Field mustard	plastid	55.99	49.02
Bra029966.1-P	Field mustard	plastid	56.27	48.79
Zm00001d028303_P003	Maize	mitochondrion, plastid	56.27	48.1
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	59.05	47.86

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS
InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	EnsemblPlantsGene:Bra018831	EnsemblPlants:Bra018831.1	EnsemblPlants:Bra018831.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004084	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0008652
GO:GO:0009058	GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0010326	GO:GO:0016740
GO:GO:0019748	GO:GO:0033506	GO:GO:0052654	GO:GO:0052655	GO:GO:0052656	GO:GO:0071267
UniProt:M4DQN8	PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF4
SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI000253EB5F	SEG:seg	:	:

Description

AT1G50110 (E=1e-175) | branched-chain amino acid aminotransferase 6 / branched-chain amino acid transaminase 6 (BCAT6)

Coordinates

chrA06:+:1709460..1711215

Molecular Weight (calculated)

38966.6 Da

IEP (calculated)

6.176

GRAVY (calculated)

-0.143

Length

359 amino acids

Sequence
(BLAST)

001: MAPSVQPSSS PLRTSEGDEK YANVKWEELG FSLIPTDCMY VAKCRQGESF TEGKIVPYGD ISISPCCPIL NYGQGLFEGL KAYRTEDDRI LIFRPHENAL
101: RMQDGAERLC MSSPSVEFFV EAVKQTVLAN KKWVPPPGKG ALYIRPLLIG SGAILGVAPA PEYTFLIYAS PVGDYHKASS GLNLKVDHKS HRAHSGGTGG
201: VKSCTNYSPV VKSLVEAKSS GFSDVLFLDA ATGRNIEEAS ACNIFIVKGN IVSTPPTSGT ILPGITRKSI SELARDIGYQ VQERDVSVDE LLEADEVFCT
301: GTAVVVKAVE TVTFHDKKVK YRTGEEALSK KLHSMLTSIQ TGLVEDTKGW MVDIDPCQC

Best Arabidopsis Sequence Match ( AT1G50110.1 )
(BLAST)

001: MAPSSSPLRT TSETDEKYAN VKWEELGFAL TPIDYMYVAK CRQGESFTQG KIVPYGDISI SPCSPILNYG QGLFEGLKAY RTEDDRIRIF RPDQNALRMQ
101: TGAERLCMTP PTLEQFVEAV KQTVLANKKW VPPPGKGTLY IRPLLLGSGA TLGVAPAPEY TFLIYASPVG DYHKVSSGLN LKVDHKYHRA HSGGTGGVKS
201: CTNYSPVVKS LLEAKSAGFS DVLFLDAATG RNIEELTACN IFIVKGNIVS TPPTSGTILP GVTRKSISEL AHDIGYQVEE RDVSVDELLE AEEVFCTGTA
301: VVVKAVETVT FHDKKVKYRT GEAALSTKLH SMLTNIQMGV VEDKKGWMVD IDPCQG

Arabidopsis Description

BCAT6Branched-chain-amino-acid aminotransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPM9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.