CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49893	Soybean	cytosol	87.74	87.99
KRH42008	Soybean	cytosol	81.06	78.65
KRH42010	Soybean	cytosol	76.32	76.97
CDY71328	Canola	cytosol, peroxisome, plastid	29.25	68.18
Bra018831.1-P	Field mustard	cytosol	61.84	61.84
CDY45046	Canola	mitochondrion	40.39	61.44
CDY22953	Canola	cytosol, peroxisome, plastid	17.27	61.39
CDY28146	Canola	cytosol	61.28	61.28
Bra014235.1-P	Field mustard	plastid	61.28	61.11
CDY45047	Canola	peroxisome	28.41	61.08
CDY03586	Canola	plastid	61.0	60.83
CDY03587	Canola	cytosol	28.41	60.71
CDY12427	Canola	cytosol	28.41	60.71
AT1G50110.1	Thale cress	cytosol	60.17	60.67
AT1G50090.1	Thale cress	cytosol	61.84	60.49
CDY03585	Canola	cytosol	60.45	60.45
CDY16426	Canola	cytosol	48.75	58.92
CDY69091	Canola	mitochondrion, peroxisome, plastid	29.8	58.79
CDY22959	Canola	cytosol	51.25	58.6
Bra039744.1-P	Field mustard	cytosol	45.96	58.1
CDY27928	Canola	cytosol	17.55	57.8
Bra001761.1-P	Field mustard	cytosol	55.99	55.83
CDX82281	Canola	cytosol	55.71	55.56
KRH42003	Soybean	cytosol	51.81	55.52
GSMUA_Achr3P15170_001	Banana	mitochondrion	59.05	55.5
Bra022448.1-P	Field mustard	cytosol	55.43	55.28
CDY51693	Canola	cytosol	55.43	55.28
CDY24619	Canola	cytosol	55.43	55.28
GSMUA_Achr8P26500_001	Banana	mitochondrion	58.5	54.97
AT3G19710.1	Thale cress	cytosol	54.04	54.8
KRH61467	Soybean	mitochondrion	58.5	54.69
TraesCS4B01G235400.3	Wheat	mitochondrion	58.22	52.38
TraesCS4D01G236800.1	Wheat	mitochondrion	57.94	52.13
TraesCS4A01G059800.1	Wheat	mitochondrion	56.82	51.13
KRH77169	Soybean	nucleus, plastid	56.82	50.25
Os03t0231600-01	Rice	mitochondrion	57.66	49.88
KRH28316	Soybean	nucleus, plastid	56.82	49.51
OQU92960	Sorghum	mitochondrion	54.6	47.0
Zm00001d028303_P003	Maize	mitochondrion, plastid	54.87	46.9
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	57.38	46.5
CDX99513	Canola	mitochondrion	7.8	45.9
KRH52160	Soybean	endoplasmic reticulum, plasma membrane, plastid	58.5	45.45
CDY66609	Canola	cytosol	55.15	40.99

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	EntrezGene:100778723
Gene3D:3.20.10.10	Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	EMBL:ACUP02004645
InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	EnsemblPlantsGene:GLYMA_07G186100
GO:GO:0003674	GO:GO:0003824	GO:GO:0004084	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0008652	GO:GO:0009058	GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0016740
GO:GO:0052654	GO:GO:0052655	GO:GO:0052656	UniProt:K7L2K0	EnsemblPlants:KRH49895	ProteinID:KRH49895
ProteinID:KRH49895.1	ProteinID:KRH49896.1	PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825
PANTHER:PTHR42825:SF4	MetaCyc:PWY-5057	MetaCyc:PWY-5076	MetaCyc:PWY-5078	MetaCyc:PWY-5101	MetaCyc:PWY-5103
MetaCyc:PWY-5104	MetaCyc:PWY-5108	MetaCyc:PWY-7767	SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI00023C6D09
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:35364190..35369120

Molecular Weight (calculated)

38573.5 Da

IEP (calculated)

7.267

GRAVY (calculated)

-0.043

Length

359 amino acids

Sequence
(BLAST)

001: MSPPSMLGNR KDGSEIAVAE NYADINWDEL GFSLVPTDYM YVMKCAKGDK FSQGSIVPFG NIEISPSAGI LNYGQGLFEG LKAHRTEDGH VLLFRPDENA
101: QRMKRGADRL CMPSPSPGQF VNAVKQIVIA NKRWVPPPGK GSLYIRPLLI GTGALLGVAP APEYTFLIYC SPVGSYQKGA LNLKVEDKLY RAISGCGGTG
201: GIKSVTNYAP VYTAMADAKA NGFSDVLFLD SATGKHIEEA SACNVFVLKD NAISTPAIDG TILPGITRKS IIDIAIDLGY QVMERSVSVE EMLGADEMFC
301: TGTAVVVNSV ASVTYKETRV DYKTGPATLS SKLRKTLVGI QTGCLEDKKS WTVRVDSTI

Best Arabidopsis Sequence Match ( AT1G50090.1 )
(BLAST)

001: MAPSVHPSSS PLFTSKADEK YANVKWDELG FALVPTDYMY VAKCKQGESF STGEIVPYGD ISISPCAGIL NYGQGLFEGL KAYRTEDGRI TLFRPDQNAI
101: RMQTGADRLC MTPPSPEQFV EAVKQTVLAN NKWVPPPGKG ALYIRPLLIG TGAVLGVASA PEYTFLIYTS PVGNYHKASS GLNLKVDHNH RRAHFGGTGG
201: VKSCTNYSPV VKSLIEAKSS GFSDVLFLDA ATGKNIEEVS TCNIFILKGN IVSTPPTSGT ILPGITRKSI CELARDIGYE VQERDLSVDE LLEAEEVFCT
301: GTAVVIKAVE TVTFHDKRVK YRTGEEAFST KLHLILTNIQ MGVVEDKKGW MMEIDHLVGT DSFPDET

Arabidopsis Description

BCAT7Putative branched-chain-amino-acid aminotransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPM8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.