Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 1
- mitochondrion 3
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27928 | Canola | cytosol | 37.7 | 21.1 |
| CDY45047 | Canola | peroxisome | 45.9 | 16.77 |
| CDY03587 | Canola | cytosol | 44.26 | 16.07 |
| CDY12427 | Canola | cytosol | 44.26 | 16.07 |
| CDY71328 | Canola | cytosol, peroxisome, plastid | 39.34 | 15.58 |
| CDY45046 | Canola | mitochondrion | 45.9 | 11.86 |
| CDY16426 | Canola | cytosol | 42.62 | 8.75 |
| CDX83089 | Canola | plastid | 57.38 | 8.45 |
| CDY08161 | Canola | endoplasmic reticulum | 55.74 | 8.29 |
| CDY68801 | Canola | plastid | 55.74 | 8.27 |
| CDY31051 | Canola | mitochondrion | 39.34 | 8.25 |
| CDY03586 | Canola | plastid | 47.54 | 8.06 |
| CDY03585 | Canola | cytosol | 45.9 | 7.8 |
| CDY28146 | Canola | cytosol | 45.9 | 7.8 |
| KRH49895 | Soybean | cytosol | 45.9 | 7.8 |
| GSMUA_Achr8P26500_001 | Banana | mitochondrion | 47.54 | 7.59 |
| KRH42010 | Soybean | cytosol | 44.26 | 7.58 |
| KRH42008 | Soybean | cytosol | 45.9 | 7.57 |
| KRH49893 | Soybean | cytosol | 44.26 | 7.54 |
| CDY63741 | Canola | mitochondrion | 42.62 | 7.43 |
| CDY20662 | Canola | mitochondrion | 40.98 | 7.25 |
| KRH42003 | Soybean | cytosol | 39.34 | 7.16 |
| CDY57927 | Canola | mitochondrion | 45.9 | 7.14 |
| CDY54321 | Canola | mitochondrion | 57.38 | 7.11 |
| GSMUA_Achr3P15170_001 | Banana | mitochondrion | 42.62 | 6.81 |
| TraesCS4D01G236800.1 | Wheat | mitochondrion | 44.26 | 6.77 |
| TraesCS4B01G235400.3 | Wheat | mitochondrion | 44.26 | 6.77 |
| TraesCS4A01G059800.1 | Wheat | mitochondrion | 44.26 | 6.77 |
| OQU92960 | Sorghum | mitochondrion | 45.9 | 6.71 |
| CDY22959 | Canola | cytosol | 34.43 | 6.69 |
| Os03t0231600-01 | Rice | mitochondrion | 44.26 | 6.51 |
| Zm00001d028303_P003 | Maize | mitochondrion, plastid | 42.62 | 6.19 |
| CDY51693 | Canola | cytosol | 36.07 | 6.11 |
| CDY24619 | Canola | cytosol | 36.07 | 6.11 |
| CDX82281 | Canola | cytosol | 36.07 | 6.11 |
| CDY31050 | Canola | mitochondrion | 37.7 | 6.1 |
| CDY20661 | Canola | mitochondrion | 37.7 | 6.1 |
| HORVU0Hr1G008950.3 | Barley | cytosol, mitochondrion | 44.26 | 6.09 |
| CDY63740 | Canola | cytosol | 42.62 | 5.74 |
| CDY57926 | Canola | cytosol | 42.62 | 5.73 |
| CDY66609 | Canola | cytosol | 40.98 | 5.18 |
| CDY69091 | Canola | mitochondrion, peroxisome, plastid | 9.84 | 3.3 |
| CDY22953 | Canola | cytosol, peroxisome, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX99513 | EnsemblPlantsGene:GSBRNA2T00107914001 | ProteinID:CDX99513 | ProteinID:CDX99513.1 | UniParc:UPI0004EDF5A9 | MapMan:35.2 |
Description
BnaC09g24790D
Coordinates
chrLK031911:+:272079..273035
Molecular Weight (calculated)
6983.6 Da
IEP (calculated)
7.697
GRAVY (calculated)
0.185
Length
61 amino acids
Sequence
(BLAST)
(BLAST)
1: MFTHRPNHFQ VPPPGKDSLY NRLFLMGIEA VLGLAPAPEY TFLSLSMFLL LETTSRLFKL D
001: MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS
Arabidopsis Description
ATBCAT-5Branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) [Source:UniProtKB/TrEMBL;Acc:F4JXK3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.