CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX86457
CDY02487
CDY08216
CDY26148
CDY33093
CDY51405
CDY58518
CDY61477

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10070.1	CDY02487	AT1G54060.1	21798944
AT1G10070.1	CDY08216	AT1G54060.1	21798944
AT1G10070.1	CDY26148	AT1G54060.1	21798944
AT1G10070.1	CDY33093	AT1G54060.1	21798944
AT1G10070.1	CDY51405	AT1G54060.1	21798944
AT1G10070.1	CDY61477	AT1G54060.1	21798944
AT1G10070.1	CDX86457	AT3G27960.1	21798944
AT1G10070.1	CDY58518	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019963.1-P	Field mustard	cytosol	78.63	92.73
CDY63740	Canola	cytosol	86.78	86.98
CDY20661	Canola	mitochondrion	71.81	86.47
CDY31050	Canola	mitochondrion	71.37	85.94
AT1G10070.1	Thale cress	mitochondrion	71.81	84.02
VIT_18s0001g08430.t01	Wine grape	mitochondrion	55.29	64.86
VIT_18s0001g08450.t01	Wine grape	mitochondrion	54.63	64.08
PGSC0003DMT400012703	Potato	mitochondrion	51.1	63.22
CDY31051	Canola	mitochondrion	40.09	62.54
PGSC0003DMT400030117	Potato	cytosol, nucleus, peroxisome	23.13	62.13
PGSC0003DMT400012709	Potato	mitochondrion	51.32	61.64
Solyc07g021630.2.1	Tomato	plastid	51.54	61.1
CDY71328	Canola	cytosol, peroxisome, plastid	20.48	60.39
CDY03587	Canola	cytosol	22.03	59.52
CDY12427	Canola	cytosol	22.03	59.52
Solyc04g077240.2.1	Tomato	mitochondrion	35.9	59.49
GSMUA_Achr3P15170_001	Banana	mitochondrion	50.0	59.42
CDY45047	Canola	peroxisome	21.81	59.28
CDY69091	Canola	mitochondrion, peroxisome, plastid	23.13	57.69
CDY20662	Canola	mitochondrion	43.61	57.39
CDY28146	Canola	cytosol	45.15	57.1
GSMUA_Achr8P26500_001	Banana	mitochondrion	48.02	57.07
CDY45046	Canola	mitochondrion	29.52	56.78
Solyc12g088220.1.1	Tomato	plastid	47.36	56.58
CDY63741	Canola	mitochondrion	42.95	55.71
CDY57927	Canola	mitochondrion	48.02	55.61
CDY22953	Canola	cytosol, peroxisome, plastid	12.33	55.45
CDY03586	Canola	plastid	43.83	55.28
CDY03585	Canola	cytosol	43.61	55.15
TraesCS4D01G236800.1	Wheat	mitochondrion	48.46	55.14
TraesCS4B01G235400.3	Wheat	mitochondrion	48.24	54.89
TraesCS4A01G059800.1	Wheat	mitochondrion	48.02	54.64
Os03t0231600-01	Rice	mitochondrion	49.56	54.22
CDY27928	Canola	cytosol	13.0	54.13
CDX83089	Canola	plastid	48.68	53.38
CDY68801	Canola	plastid	48.24	53.28
CDY16426	Canola	cytosol	34.36	52.53
OQU92960	Sorghum	mitochondrion	48.24	52.52
Zm00001d028303_P003	Maize	mitochondrion, plastid	47.58	51.43
CDY22959	Canola	cytosol	35.46	51.27
CDY24619	Canola	cytosol	40.31	50.83
CDY08161	Canola	endoplasmic reticulum	45.81	50.73
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	49.12	50.34
CDY51693	Canola	cytosol	39.65	50.0
PGSC0003DMT400030118	Potato	mitochondrion	44.05	49.75
CDX82281	Canola	cytosol	38.99	49.17
CDY54321	Canola	mitochondrion	48.68	44.92
CDX99513	Canola	mitochondrion	5.73	42.62
CDY66609	Canola	cytosol	38.99	36.65

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	GO:A0A078J5F8	UniProt:A0A078J5F8
InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	EnsemblPlants:CDY57926
ProteinID:CDY57926	ProteinID:CDY57926.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004084	GO:GO:0008150
GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009058	GO:GO:0009081	GO:GO:0009082
GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655	GO:GO:0052656	EnsemblPlantsGene:GSBRNA2T00022858001
PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF5	MetaCyc:PWY-5057
MetaCyc:PWY-5076	MetaCyc:PWY-5078	MetaCyc:PWY-5101	MetaCyc:PWY-5103	MetaCyc:PWY-5104	MetaCyc:PWY-5108
SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI0004EF3DE7	:	:	:

Description

BnaA06g37960DBranched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078J5F8]

Coordinates

chrLK033617:-:7079..10079

Molecular Weight (calculated)

49830.7 Da

IEP (calculated)

8.150

GRAVY (calculated)

-0.246

Length

454 amino acids

Sequence
(BLAST)

001: MVMDEDVGKT NDVERTQRTE VVYPTKTSAS DVAITSQVPP PLLIFGAPIK ETNHLFTTKD KGSVIVKMNK TISSLRKSLV LPLHVHIRTL QSFSKYNAQA
101: ASALQEERKK PTYQDDNEYA DMDWDNLGFG LTPADYMYVM KCSKDGEFTK GELSRFGNIQ LSPSAGVLNY GQAIYEGTKV YRKENGKLLL FRPDHNAVRM
201: QLGAERMLMP SPSVDQFVDA VKQTAFANKR WVPPSGKGSL YIRPLLMGSG PVLGLAPAPE YTFIIYASPV GNYFKEGTAA LNLYVEEEYV RAAPGGAGGV
301: KSITNYAPVL KALSRAKSRG FSDILYLDAV KKKYLEEASS CNVFVVKGRT ISTPATNGTI LEGITRKSVM EIASDQGYQV VEKAVHVDEV MDADEVFCTG
401: TAVGVAPVGT ITYQDKRVRY ETGDESVCQK LRSVLVGIQT GTIEDTKGWV TCIN

Best Arabidopsis Sequence Match ( AT1G10070.2 )
(BLAST)

001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN

Arabidopsis Description

BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.