Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99513 | Canola | mitochondrion | 21.1 | 37.7 |
| CDY71328 | Canola | cytosol, peroxisome, plastid | 52.29 | 37.01 |
| CDY45047 | Canola | peroxisome | 55.05 | 35.93 |
| CDY03587 | Canola | cytosol | 53.21 | 34.52 |
| CDY12427 | Canola | cytosol | 53.21 | 34.52 |
| CDY16426 | Canola | cytosol | 57.8 | 21.21 |
| CDY22953 | Canola | cytosol, peroxisome, plastid | 19.27 | 20.79 |
| CDY03585 | Canola | cytosol | 67.89 | 20.61 |
| CDY28146 | Canola | cytosol | 67.89 | 20.61 |
| CDY45046 | Canola | mitochondrion | 43.12 | 19.92 |
| CDY31051 | Canola | mitochondrion | 51.38 | 19.24 |
| KRH49895 | Soybean | cytosol | 57.8 | 17.55 |
| CDY03586 | Canola | plastid | 56.88 | 17.22 |
| KRH42010 | Soybean | cytosol | 55.05 | 16.85 |
| KRH49893 | Soybean | cytosol | 55.05 | 16.76 |
| CDY22959 | Canola | cytosol | 46.79 | 16.24 |
| CDY20662 | Canola | mitochondrion | 51.38 | 16.23 |
| TraesCS4D01G236800.1 | Wheat | mitochondrion | 58.72 | 16.04 |
| TraesCS4B01G235400.3 | Wheat | mitochondrion | 58.72 | 16.04 |
| KRH42008 | Soybean | cytosol | 53.21 | 15.68 |
| Os03t0231600-01 | Rice | mitochondrion | 59.63 | 15.66 |
| TraesCS4A01G059800.1 | Wheat | mitochondrion | 56.88 | 15.54 |
| KRH42003 | Soybean | cytosol | 47.71 | 15.52 |
| CDY63741 | Canola | mitochondrion | 49.54 | 15.43 |
| CDY31050 | Canola | mitochondrion | 51.38 | 14.85 |
| CDY24619 | Canola | cytosol | 48.62 | 14.72 |
| CDY51693 | Canola | cytosol | 48.62 | 14.72 |
| GSMUA_Achr3P15170_001 | Banana | mitochondrion | 51.38 | 14.66 |
| GSMUA_Achr8P26500_001 | Banana | mitochondrion | 51.38 | 14.66 |
| CDY20661 | Canola | mitochondrion | 50.46 | 14.59 |
| CDX83089 | Canola | plastid | 55.05 | 14.49 |
| HORVU0Hr1G008950.3 | Barley | cytosol, mitochondrion | 58.72 | 14.45 |
| CDX82281 | Canola | cytosol | 47.71 | 14.44 |
| CDY08161 | Canola | endoplasmic reticulum | 54.13 | 14.39 |
| OQU92960 | Sorghum | mitochondrion | 55.05 | 14.39 |
| Zm00001d028303_P003 | Maize | mitochondrion, plastid | 54.13 | 14.05 |
| CDY68801 | Canola | plastid | 52.29 | 13.87 |
| CDY57927 | Canola | mitochondrion | 48.62 | 13.52 |
| CDY57926 | Canola | cytosol | 54.13 | 13.0 |
| CDY66609 | Canola | cytosol | 56.88 | 12.84 |
| CDY63740 | Canola | cytosol | 53.21 | 12.8 |
| CDY54321 | Canola | mitochondrion | 55.05 | 12.2 |
| CDY69091 | Canola | mitochondrion, peroxisome, plastid | 5.5 | 3.3 |
Protein Annotations
| EnsemblPlants:CDY27928 | EnsemblPlantsGene:GSBRNA2T00038824001 | Gene3D:3.30.470.10 | GO:A0A078GTF4 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | InterPro:Aminotransferase-like | PANTHER:PTHR42825 | PANTHER:PTHR42825:SF6 | ProteinID:CDY27928 |
| ProteinID:CDY27928.1 | SUPFAM:SSF56752 | UniParc:UPI0004EEE49F | UniProt:A0A078GTF4 | MapMan:4.1.2.2.8.6 | MapMan:4.1.3.2.4 |
| MapMan:4.2.7.1 | : | : | : | : | : |
Description
BnaCnng05130DBnaCnng05130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTF4]
Coordinates
chrLK032212:+:237051..237471
Molecular Weight (calculated)
11716.4 Da
IEP (calculated)
8.624
GRAVY (calculated)
0.234
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDGAERLCM ASPSVEFFVE AVKQTVIANK KLVPPPGKGA LYIRPLLIGS GANLGVAPAP EYTFLIYASP VGDYHKVSFC VAAAGLKYCV PAKRLLRTEM
101: VESCREAQV
101: VESCREAQV
001: MYVAKCRQGE SFTQGKIVPY GDISISPCSP ILNYGQGLFE GLKAYRTEDD RIRIFRPDQN ALRMQTGAER LCMTPPTLEQ FVEAVKQTVL ANKKWVPPPG
101: KGTLYIRPLL LGSGATLGVA PAPEYTFLIY ASPVGDYHKV SSGLNLKVDH KYHRAHSGGT GGVKSCTNYS PVVKSLLEAK SAGFSDVLFL DAATGRNIEE
201: LTACNIFIVK GNIVSTPPTS GTILPGVTRK SISELAHDIG YQVEERDVSV DELLEAEEVF CTGTAVVVKA VETVTFHDKK VKYRTGEAAL STKLHSMLTN
301: IQMGVVEDKK GWMVDIDPCQ G
101: KGTLYIRPLL LGSGATLGVA PAPEYTFLIY ASPVGDYHKV SSGLNLKVDH KYHRAHSGGT GGVKSCTNYS PVVKSLLEAK SAGFSDVLFL DAATGRNIEE
201: LTACNIFIVK GNIVSTPPTS GTILPGVTRK SISELAHDIG YQVEERDVSV DELLEAEEVF CTGTAVVVKA VETVTFHDKK VKYRTGEAAL STKLHSMLTN
301: IQMGVVEDKK GWMVDIDPCQ G
Arabidopsis Description
BCAT6Branched-chain-amino-acid aminotransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPM9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.