CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52160	Soybean	endoplasmic reticulum, plasma membrane, plastid	89.58	74.46
CDY31051	Canola	mitochondrion	48.96	64.6
Bra019964.1-P	Field mustard	cytosol	59.38	61.79
KRH42010	Soybean	cytosol	56.51	60.96
GSMUA_Achr3P15170_001	Banana	mitochondrion	60.42	60.73
CDY20662	Canola	mitochondrion	53.91	60.0
GSMUA_Achr8P26500_001	Banana	mitochondrion	58.33	58.64
Bra018464.1-P	Field mustard	mitochondrion	52.6	58.55
KRH49895	Soybean	cytosol	54.69	58.5
CDY57927	Canola	mitochondrion	59.38	58.16
KRH49893	Soybean	cytosol	53.65	57.54
CDY63741	Canola	mitochondrion	51.56	56.57
KRH77169	Soybean	nucleus, plastid	59.11	55.91
TraesCS4D01G236800.1	Wheat	mitochondrion	58.07	55.89
KRH28316	Soybean	nucleus, plastid	59.9	55.83
KRH42008	Soybean	cytosol	52.86	54.86
OQU92960	Sorghum	mitochondrion	59.38	54.68
TraesCS4B01G235400.3	Wheat	mitochondrion	56.77	54.64
KRH42003	Soybean	cytosol	47.66	54.63
Os03t0231600-01	Rice	mitochondrion	58.07	53.73
TraesCS4A01G059800.1	Wheat	mitochondrion	55.73	53.63
Zm00001d028303_P003	Maize	mitochondrion, plastid	58.59	53.57
HORVU0Hr1G008950.3	Barley	cytosol, mitochondrion	56.77	49.21
AT1G10060.5	Thale cress	cytosol	59.9	47.92

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	EntrezGene:100818776
Gene3D:3.20.10.10	Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	EMBL:ACUP02002168
InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	EnsemblPlantsGene:GLYMA_04G049200
GO:GO:0003674	GO:GO:0003824	GO:GO:0004084	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0008652	GO:GO:0009058	GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0016740
GO:GO:0052654	GO:GO:0052655	GO:GO:0052656	UniProt:I1JTU1	EnsemblPlants:KRH61467	ProteinID:KRH61467
ProteinID:KRH61467.1	PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF5
MetaCyc:PWY-5057	MetaCyc:PWY-5076	MetaCyc:PWY-5078	MetaCyc:PWY-5101	MetaCyc:PWY-5103	MetaCyc:PWY-5104
MetaCyc:PWY-5108	MetaCyc:PWY-7767	SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI00023C14EB	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:3978732..3986247

Molecular Weight (calculated)

41992.2 Da

IEP (calculated)

7.148

GRAVY (calculated)

-0.209

Length

384 amino acids

Sequence
(BLAST)

001: MIQRIVYFPS LRKLLLRAGS NSASSKIGTN NCFASQPSPL RSHSSDDEYA DVDWDSLGFG LMTTDYMYIT KCCEGQNFGQ GQLSRYGNIE LSPSAGVLNY
101: GQGLFEGTKA YRKENGGLLL FRPEENAIRM KIGAERMCMA SPSIDNFVDA LKQTVLANKR WVPPPGKGSL YLRPLLLGTG PVLGLAPAPQ YTFLIFASPV
201: RNYFKEGSAP LNLYVEENFD RASSRGTGNV KTISNYAPVL MAQIQAKKRG FSDVLYLDSA TKKNLEEVSS CNIFIAKGKC ISTPATNGTI LSGITRKSVI
301: EIARDHGYQV EERVVNVDEL IEADEVFCTG TAVGVAPVGS ITYQDKRMEY ITGSGTICQE LNNTISGIQT GTIEDKKGWI VEVD

Best Arabidopsis Sequence Match ( AT1G10070.2 )
(BLAST)

001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN

Arabidopsis Description

BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.