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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G407900.1 Wheat plastid 74.53 87.8
TraesCS2B01G426100.1 Wheat plastid 74.12 87.32
TraesCS2D01G405200.1 Wheat plastid 72.46 85.37
Os04t0559400-01 Rice plastid 65.63 77.32
Zm00001d002694_P004 Maize endoplasmic reticulum 60.25 76.58
VIT_00s0657g00010.t01 Wine grape mitochondrion, peroxisome 14.29 63.89
Solyc02g091970.2.1 Tomato plastid 46.17 59.15
HORVU1Hr1G053320.7 Barley plastid 49.9 58.64
KRH77169 Soybean nucleus, plastid 48.65 57.88
GSMUA_Achr8P05090_001 Banana plastid 49.28 57.49
KRH28316 Soybean nucleus, plastid 48.86 57.28
GSMUA_Achr3P15180_001 Banana plastid 48.86 56.46
KXG26892 Sorghum cytosol, mitochondrion, plastid 64.18 56.06
CDY68801 Canola plastid 46.58 54.74
AT3G49680.1 Thale cress plastid 46.38 54.24
PGSC0003DMT400055202 Potato plastid 46.58 53.96
Bra017964.1-P Field mustard plastid 45.76 53.9
HORVU1Hr1G002790.1 Barley endoplasmic reticulum 28.16 53.54
HORVU4Hr1G087100.5 Barley mitochondrion 53.21 53.54
CDX83089 Canola plastid 45.76 53.38
PGSC0003DMT400044068 Potato plastid 46.17 53.22
Solyc03g043880.2.1 Tomato plastid 45.96 53.11
Bra029966.1-P Field mustard plastid 45.34 52.9
CDY08161 Canola endoplasmic reticulum 44.72 52.68
HORVU0Hr1G008950.3 Barley cytosol, mitochondrion 44.1 48.08
CDY54321 Canola mitochondrion 46.17 45.33
Protein Annotations
KEGG:00270+2.6.1.42KEGG:00280+2.6.1.42KEGG:00290+2.6.1.42KEGG:00770+2.6.1.42KEGG:00966+2.6.1.42Gene3D:3.20.10.10
Gene3D:3.30.470.10MapMan:4.1.2.2.8.6MapMan:4.1.3.2.4MapMan:4.2.7.1UniProt:A0A287J1Q5InterPro:Aminotrans_IV
InterPro:Aminotrans_IV_CSInterPro:Aminotransferase-likeInterPro:BCAT_familyInterPro:B_amino_transIIGO:GO:0003674GO:GO:0003824
GO:GO:0004084GO:GO:0008150GO:GO:0008152GO:GO:0008483GO:GO:0008652GO:GO:0009058
GO:GO:0009081GO:GO:0009082GO:GO:0009987GO:GO:0016740GO:GO:0052654GO:GO:0052655
GO:GO:0052656EnsemblPlantsGene:HORVU2Hr1G096380EnsemblPlants:HORVU2Hr1G096380.2PFAM:PF01063ScanProsite:PS00770PANTHER:PTHR42825
PANTHER:PTHR42825:SF1SUPFAM:SSF56752TIGRFAMs:TIGR01123UniParc:UPI000B488A21SEG:seg:
Description
Branched-chain-amino-acid aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A287J1Q5]
Coordinates
chrchr2H:-:674253924..674257860
Molecular Weight (calculated)
52675.6 Da
IEP (calculated)
9.599
GRAVY (calculated)
-0.221
Length
483 amino acids
Sequence
(BLAST)
001: PAASGLRTRT DRVDPFRHPA GEPMSTSRRH VRRSCVPQPP PRDSFSSYVS PPPCRVVNQP TPAHRRPPAP ARRTDMELRL RASASPASAS PRGTVVSPCP
101: RPYPRLPSRP IQKRLAGSAV PRRGPAARRR PCSTLMTASY NTGTPDLVDF DWETLGFQLV PTDFMYIMKC SSDGVFTKGE LVPYGPIELN PAAAVLNYGQ
201: GLLEGLRAHR KEDGSVIVFR PEENALRMRI GADRLCMPAP SVEQFLSGVK QTILANKRWV PPTGKGSLYI RPLLIGSGAM LGVAPAPEYT FVVYVCPVGH
301: YFKDGLSPIS LLTEEEYHRA APGGTGDIKT IGNYASVVSA QRRAKEKGHS DVLYLDPVHK KFVEEVSSCN IFMVKDNVIS TPLLTGTILP GITRRSIIEI
401: ARNLGIQVEE RLIAIDELLD ADEVFCTGTA VVLSPVGCIV YHGRRVEYGN GKVGAVSQQL YSALTAIQKG LAEDSMGWSV QLN
Best Arabidopsis Sequence Match ( AT1G10070.1 )
(BLAST)
001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN
Arabidopsis Description
BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.