Factsheet for Os04t0559400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G426100.1	Wheat	plastid	75.85	75.85
TraesCS2A01G407900.1	Wheat	plastid	75.37	75.37
TraesCS2D01G405200.1	Wheat	plastid	74.63	74.63
Zm00001d002694_P004	Maize	endoplasmic reticulum	67.8	73.16
Os10t0549500-00	Rice	cytosol	44.63	66.79
HORVU2Hr1G096380.2	Barley	plastid	77.32	65.63
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	16.1	61.11
Solyc02g091970.2.1	Tomato	plastid	52.2	56.76
Os03t0106400-01	Rice	plastid	55.12	55.8
Os05t0558400-01	Rice	plastid	55.37	55.5
KRH77169	Soybean	nucleus, plastid	54.88	55.42
GSMUA_Achr8P05090_001	Banana	plastid	55.12	54.59
GSMUA_Achr3P15180_001	Banana	plastid	55.37	54.31
KRH28316	Soybean	nucleus, plastid	54.39	54.13
KXG26892	Sorghum	cytosol, mitochondrion, plastid	71.71	53.16
Bra017964.1-P	Field mustard	plastid	52.44	52.44
AT3G49680.1	Thale cress	plastid	52.44	52.06
PGSC0003DMT400055202	Potato	plastid	52.93	52.04
CDY68801	Canola	plastid	51.95	51.82
CDX83089	Canola	plastid	51.95	51.45
PGSC0003DMT400044068	Potato	plastid	51.95	50.84
Bra029966.1-P	Field mustard	plastid	51.22	50.72
Solyc03g043880.2.1	Tomato	plastid	51.71	50.72
CDY08161	Canola	endoplasmic reticulum	50.0	50.0
Os03t0231600-01	Rice	mitochondrion	49.76	49.16
CDY54321	Canola	mitochondrion	51.71	43.09

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	EntrezGene:4336645	EMBL:AK106376
InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	ProteinID:BAF15454.1	ProteinID:BAS90459.1	InterPro:BCAT_family
InterPro:B_amino_transII	ProteinID:CAE01841.2	ProteinID:CAE03491.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004084
GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009058	GO:GO:0009081
GO:GO:0009082	GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655	GO:GO:0052656
EnsemblPlantsGene:Os04g0559400	EnsemblPlants:Os04t0559400-01	PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825
PANTHER:PTHR42825:SF1	UniProt:Q7XPR5	SUPFAM:SSF56752	TIGRFAMs:TIGR01123	UniParc:UPI000021C75E	RefSeq:XP_015633615.1
RefSeq:XP_015633617.1	SEG:seg	:	:	:	:

Description

Similar to Branched-chain-amino-acid aminotransferase 5, chloroplast precursor (EC 2.6.1.42) (Atbcat-5). (Os04t0559400-01);Similar to Branched-chain-amino-acid aminotransferase. (Os04t0559400-02)

Coordinates

chr4:-:28026584..28030509

Molecular Weight (calculated)

44552.9 Da

IEP (calculated)

7.650

GRAVY (calculated)

0.014

Length

410 amino acids

Sequence
(BLAST)

001: MELLPRVGVA APGPGRGGAS PSPTRRHRAP SHPILKRSAA VCGAVAVCRG GAVARRSRWS TLVTAAYYTG TAELVDFNWE TLGFQPVPTD FMYVMRCSEE
101: GVFTKGELVP YGPIELNPAA GVLNYGQGLL EGLRAHRKED GSVLLFRPDE NALRMRVGAD RLCMPAPSVE QFLEAIKLTI LANKRWVPPT GKGSLYIRPL
201: LIGSGAILGV APAPEYTFVV FACPVGHYFK DGLSPISLLT EEEYQCAAPG GTGDIKTIGN YASAVYAKER AKERGHSDVL YLDPVHKKFV EELSSCNIFM
301: VKDNIISTPL LTGTVLPGIT RRSIIEYARS LGFQVEECLI TIDELLDADE VFCTGTSVVL SSVGCIVYQG RRVEYGNQKF RTVSQQLYSA LTAIQKGLVE
401: DSMGWTVQLN

Best Arabidopsis Sequence Match ( AT5G65780.1 )
(BLAST)

001: MERSAVASGF HRNYILCASR AATSTTRLHS LSSLRNFPSS SLRIRHCPSP ISSNFIVSEV SRNRRCDAVS SSTTDVTELA EIDWDKIDFG LKPTDYMYAM
101: KCSRDGEFSQ GQLQPFGNID INPAAGVLNY GQGLFEGLKA YRKQDGNILL FRPEENAIRM RNGAERMCMP SPTVEQFVEA VKTTVLANKR WIPPPGKGSL
201: YIRPLLMGTG AVLGLAPAPE YTFLIFVSPV GNYFKEGVAP INLIVETEFH RATPGGTGGV KTIGNYAAVL KAQSIAKAKG YSDVLYLDCL HKRYLEEVSS
301: CNIFIVKDNV ISTPEIKGTI LPGITRKSII EVARSQGFKV EERNVTVDEL VEADEVFCTG TAVVLSPVGS ITYKSQRFSY GEDGFGTVSK QLYTSLTSLQ
401: MGLSEDNMNW TVQLS

Arabidopsis Description

ATBCAT-5Branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5) [Source:UniProtKB/TrEMBL;Acc:F4JXK3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.