Factsheet for TraesCS2A01G407900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G426100.1	Wheat	plastid	96.83	96.83
TraesCS2D01G405200.1	Wheat	plastid	93.17	93.17
Zm00001d002694_P004	Maize	endoplasmic reticulum	70.49	76.05
Os04t0559400-01	Rice	plastid	75.37	75.37
HORVU2Hr1G096380.2	Barley	plastid	87.8	74.53
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	16.83	63.89
TraesCS5A01G531200.1	Wheat	plastid	60.49	60.49
TraesCS1A01G208500.1	Wheat	plastid	58.78	58.78
Solyc02g091970.2.1	Tomato	plastid	53.9	58.62
KRH77169	Soybean	nucleus, plastid	57.32	57.88
KRH28316	Soybean	nucleus, plastid	57.32	57.04
GSMUA_Achr8P05090_001	Banana	plastid	57.56	57.0
GSMUA_Achr3P15180_001	Banana	plastid	57.8	56.7
AT3G49680.1	Thale cress	plastid	56.1	55.69
CDX83089	Canola	plastid	56.1	55.56
CDY68801	Canola	plastid	55.37	55.23
KXG26892	Sorghum	cytosol, mitochondrion, plastid	74.39	55.15
Bra017964.1-P	Field mustard	plastid	55.12	55.12
Bra029966.1-P	Field mustard	plastid	55.61	55.07
PGSC0003DMT400055202	Potato	plastid	55.85	54.92
PGSC0003DMT400044068	Potato	plastid	54.88	53.7
TraesCS4A01G059800.1	Wheat	mitochondrion	52.2	53.63
Solyc03g043880.2.1	Tomato	plastid	54.15	53.11
CDY08161	Canola	endoplasmic reticulum	51.95	51.95
CDY54321	Canola	mitochondrion	55.85	46.54

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS
InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674	GO:GO:0003824	GO:GO:0004084
GO:GO:0008150	GO:GO:0008152	GO:GO:0009081	GO:GO:0009987	GO:GO:0016740	PFAM:PF01063
PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF1	SUPFAM:SSF56752	TIGRFAMs:TIGR01123
EnsemblPlantsGene:TraesCS2A01G407900	EnsemblPlants:TraesCS2A01G407900.1	TIGR:cd01557	SEG:seg	:	:

Description

No Description!

Coordinates

chr2A:+:665695730..665699208

Molecular Weight (calculated)

44219.5 Da

IEP (calculated)

8.726

GRAVY (calculated)

-0.027

Length

410 amino acids

Sequence
(BLAST)

001: MELRLRAPVS RASASPRGTA VSPSPRPHPR LPSQPIQKRF AGSAVSVSRR GTAARSSPCS ALMTASYNTG TPDLVDFDWE TLGFQLVPTD FMYIMKCSSD
101: GVFTKGELVP YGPIEMNPAA AVLNYGQGLL EGLRAHRKED GSVIVFRPEE NALRMRIGAD RLCMPAPSVE QFLSGVKQTI LANKRWVPPT GKGSLYIRPL
201: LIGSGAMLGV APAPEYTFVV YVCPVGHYFK DGLSPISLLT EEEYHRAAPG GTGDIKTIGN YASVVSAQRR AKAKGHSDVL YLDPVHKKFV EEVSSCNIFM
301: VKDNVISTPL LTGTILPGIT RRSIIEIARN LGIQVEERLI AIDELLDADE VFCTGTAVVL SPVGSIVYHG RRVEYGGGKV GAVSQQLYSA LTAIQKGLAE
401: DSMGWGVQLN

Best Arabidopsis Sequence Match ( AT1G10070.1 )
(BLAST)

001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN

Arabidopsis Description

BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.