Factsheet for Zm00001d002694_P004

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

mitochondrion 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G405200.1	Wheat	plastid	76.84	71.22
TraesCS2B01G426100.1	Wheat	plastid	76.32	70.73
TraesCS2A01G407900.1	Wheat	plastid	76.05	70.49
Zm00001d045803_P001	Maize	cytosol, peroxisome, plastid	15.0	67.86
Os04t0559400-01	Rice	plastid	73.16	67.8
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	17.89	62.96
HORVU2Hr1G096380.2	Barley	plastid	76.58	60.25
KXG26892	Sorghum	cytosol, mitochondrion, plastid	84.74	58.23
Solyc02g091970.2.1	Tomato	plastid	56.32	56.76
KRH77169	Soybean	nucleus, plastid	58.42	54.68
GSMUA_Achr8P05090_001	Banana	plastid	59.21	54.35
Zm00001d029848_P002	Maize	endoplasmic reticulum, plasma membrane	58.95	53.72
KRH28316	Soybean	nucleus, plastid	57.89	53.4
GSMUA_Achr3P15180_001	Banana	plastid	57.37	52.15
AT3G49680.1	Thale cress	plastid	56.58	52.06
Bra017964.1-P	Field mustard	plastid	56.05	51.95
CDY68801	Canola	plastid	56.05	51.82
Zm00001d048539_P001	Maize	mitochondrion, plastid	59.47	51.48
PGSC0003DMT400055202	Potato	plastid	56.32	51.32
CDX83089	Canola	plastid	55.79	51.21
Bra029966.1-P	Field mustard	plastid	55.0	50.48
Solyc03g043880.2.1	Tomato	plastid	55.26	50.24
PGSC0003DMT400044068	Potato	plastid	55.26	50.12
CDY08161	Canola	endoplasmic reticulum	53.95	50.0
Zm00001d028303_P003	Maize	mitochondrion, plastid	51.58	46.67
CDY54321	Canola	mitochondrion	55.53	42.89

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	UniProt:A0A1D6E3I5	InterPro:Aminotrans_IV
InterPro:Aminotrans_IV_CS	InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674	GO:GO:0003824
GO:GO:0004084	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0008652	GO:GO:0009058
GO:GO:0009081	GO:GO:0009082	GO:GO:0009987	GO:GO:0016740	GO:GO:0052654	GO:GO:0052655
GO:GO:0052656	ProteinID:ONM15105.1	PFAM:PF01063	PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825
PANTHER:PTHR42825:SF1	SUPFAM:SSF56752	UniParc:UPI0008441CAA	EnsemblPlantsGene:Zm00001d002694	EnsemblPlants:Zm00001d002694_P004	EnsemblPlants:Zm00001d002694_T004

Description

Branched-chain-amino-acid aminotransferase 3 chloroplastic

Coordinates

chr2:+:19421000..19428059

Molecular Weight (calculated)

41758.6 Da

IEP (calculated)

6.511

GRAVY (calculated)

0.063

Length

380 amino acids

Sequence
(BLAST)

001: MGSFVLGLVF FSTGTPDLVD FNWDDLGFQL IPTDFMYLMS CSSDGVFMNG KLVPYGSIEL NPAAAVLNYG QGLLEGLRSH RKEDGSILLF RPHENARRME
101: IGADRLCMPA PSVEQFLEAV KLTVLANKHW VPPFGKGSLY IRPQLIGSGA MLGVAPAPQY TFIVFVCPVG HYFKGGLAPI SLLTEEEYHR AAPGGTGDIK
201: TIGNYASVMR KCEFSKYFLI PHSTSISVPY NRVVSAQRRS KEKGHSDVLY LDPLHNKFVE EVSSCNIFMV KDNIISTPLL TGTILPGITR RSVIEISQNL
301: GFQVEERLIT IDELLGADEV FCTGTAVVLS PVGSITYRGR RVEYGKNQEA GVVSQQLYAA LTAIQKGLTE DSMGWTLQLT

Best Arabidopsis Sequence Match ( AT1G10070.1 )
(BLAST)

001: MIKTITSLRK TLVLPLHLHI RTLQTFAKYN AQAASALREE RKKPLYQNGD DVYADLDWDN LGFGLNPADY MYVMKCSKDG EFTQGELSPY GNIQLSPSAG
101: VLNYGQAIYE GTKAYRKENG KLLLFRPDHN AIRMKLGAER MLMPSPSVDQ FVNAVKQTAL ANKRWVPPAG KGTLYIRPLL MGSGPILGLG PAPEYTFIVY
201: ASPVGNYFKE GMAALNLYVE EEYVRAAPGG AGGVKSITNY APVLKALSRA KSRGFSDVLY LDSVKKKYLE EASSCNVFVV KGRTISTPAT NGTILEGITR
301: KSVMEIASDQ GYQVVEKAVH VDEVMDADEV FCTGTAVVVA PVGTITYQEK RVEYKTGDES VCQKLRSVLV GIQTGLIEDN KGWVTDIN

Arabidopsis Description

BCAT2Branched-chain-amino-acid aminotransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M439]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.