Factsheet for TraesCS1D01G211700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G222500.1	Wheat	plastid	97.56	97.56
TraesCS1A01G208500.1	Wheat	plastid	96.34	96.34
HORVU1Hr1G053320.7	Barley	plastid	94.88	94.65
Os10t0549500-00	Rice	cytosol	61.22	91.61
Os05t0558400-01	Rice	plastid	85.12	85.33
Zm00001d029848_P002	Maize	endoplasmic reticulum, plasma membrane	81.22	79.86
VIT_00s0657g00010.t01	Wine grape	mitochondrion, peroxisome	20.0	75.93
TraesCS4D01G356200.1	Wheat	plastid	74.15	74.15
KXG38964	Sorghum	plastid	76.34	70.65
GSMUA_Achr8P05090_001	Banana	plastid	69.02	68.36
Solyc02g091970.2.1	Tomato	plastid	62.44	67.9
KRH77169	Soybean	nucleus, plastid	66.59	67.24
KRH28316	Soybean	nucleus, plastid	67.32	66.99
Bra017964.1-P	Field mustard	plastid	64.63	64.63
GSMUA_Achr3P15180_001	Banana	plastid	65.85	64.59
AT3G49680.1	Thale cress	plastid	64.88	64.41
CDY68801	Canola	plastid	64.39	64.23
PGSC0003DMT400055202	Potato	plastid	63.9	62.83
CDX83089	Canola	plastid	63.17	62.56
Bra029966.1-P	Field mustard	plastid	62.68	62.08
CDY08161	Canola	endoplasmic reticulum	61.95	61.95
PGSC0003DMT400044068	Potato	plastid	63.17	61.81
Solyc03g043880.2.1	Tomato	plastid	62.68	61.48
TraesCS2D01G405200.1	Wheat	plastid	58.78	58.78
TraesCS4D01G236800.1	Wheat	mitochondrion	55.12	56.64
CDY54321	Canola	mitochondrion	63.66	53.05

Protein Annotations

KEGG:00270+2.6.1.42	KEGG:00280+2.6.1.42	KEGG:00290+2.6.1.42	KEGG:00770+2.6.1.42	KEGG:00966+2.6.1.42	Gene3D:3.20.10.10
Gene3D:3.30.470.10	MapMan:4.1.2.2.8.6	MapMan:4.1.3.2.4	MapMan:4.2.7.1	InterPro:Aminotrans_IV	InterPro:Aminotrans_IV_CS
InterPro:Aminotransferase-like	InterPro:BCAT_family	InterPro:B_amino_transII	GO:GO:0003674	GO:GO:0003824	GO:GO:0004084
GO:GO:0008150	GO:GO:0008152	GO:GO:0009081	GO:GO:0009987	GO:GO:0016740	PFAM:PF01063
PIRSF:PIRSF006468	ScanProsite:PS00770	PANTHER:PTHR42825	PANTHER:PTHR42825:SF3	SUPFAM:SSF56752	TIGRFAMs:TIGR01123
EnsemblPlantsGene:TraesCS1D01G211700	EnsemblPlants:TraesCS1D01G211700.1	TIGR:cd01557	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:+:297521528..297526606

Molecular Weight (calculated)

44153.6 Da

IEP (calculated)

7.747

GRAVY (calculated)

0.008

Length

410 amino acids

Sequence
(BLAST)

001: MDCGTASHGA LLAAAPLAVR RPRLLPLSPP PSTPSIQIQN RLYSMSLLPL RKARGMGICE ASLASNYTQT SEFADLDWEN LGFGLVQTDY MYTAKCGPDG
101: NFDKGGMVPF GPIEMNPASG VLNYGQGLFE GLKAYRKTDG SILLFRPMEN AMRMQTGAER MCMPAPPVEQ FVDAVKQTVL ANKRWVPPTG KGSLYIRPLL
201: VGSGAVLGLA PAPEYTFIIF SSPVGNYFKE GLAPINLIVE DKFHRATPGG TGGVKTIGNY ASVLMAQKIA KEKGYSDVLY LDAVEKKYLE EVSSCNIFVV
301: KGNVISTPAI KGTILPGITR KSIIDVALTK GFQVEERLVS VDELLDADEV FCTGTAVVVS PVGSITYQGK RIEYAGNQGV GAVSRQLYTS LTSLQMGQVE
401: DPMGWTVQLN

Best Arabidopsis Sequence Match ( AT3G49680.1 )
(BLAST)

001: MERAAILPSV NQNYLLCPSR AFSTRLHSST RNLSPPSFAS IKLQHSSSSV SSNGGISLTR CNAVSSNSSS TLVTELADID WDTVGFGLKP ADYMYVMKCN
101: IDGEFSKGEL QRFGNIEISP SAGVLNYGQG LFEGLKAYRK KDGNNILLFR PEENAKRMRN GAERMCMPAP TVEQFVEAVT ETVLANKRWV PPPGKGSLYV
201: RPLLMGTGAV LGLAPAPEYT FIIYVSPVGN YFKEGVAPIN LIVENEFHRA TPGGTGGVKT IGNYAAVLKA QSIAKAKGYS DVLYLDCIYK RYLEEVSSCN
301: IFIVKDNVIS TPEIKGTILP GITRKSMIDV ARTQGFQVEE RNVTVDELLE ADEVFCTGTA VVVSPVGSVT YKGKRVSYGE GTFGTVSKQL YTVLTSLQMG
401: LIEDNMKWTV NLS

Arabidopsis Description

BCAT3Branched-chain-amino-acid aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M401]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.