Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16217 | Canola | nucleus | 72.14 | 74.45 |
| CDY46422 | Canola | nucleus | 70.24 | 73.02 |
| Bra016305.1-P | Field mustard | nucleus | 70.48 | 72.73 |
| CDY14707 | Canola | nucleus | 70.95 | 71.46 |
| CDY52255 | Canola | nucleus | 68.57 | 70.07 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 58.81 | 55.63 |
| KRH74755 | Soybean | nucleus | 57.14 | 53.81 |
| KRH69381 | Soybean | nucleus | 56.9 | 53.71 |
| PGSC0003DMT400019928 | Potato | nucleus | 50.71 | 48.74 |
| Solyc01g010440.2.1 | Tomato | nucleus | 50.71 | 48.19 |
| KRH75984 | Soybean | cytosol | 24.05 | 47.64 |
| PGSC0003DMT400045462 | Potato | nucleus | 44.76 | 43.93 |
| AT3G24690.1 | Thale cress | mitochondrion | 15.48 | 41.14 |
| KRH74859 | Soybean | peroxisome | 35.0 | 39.73 |
| Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 27.14 | 34.65 |
Protein Annotations
| MapMan:35.2 | EntrezGene:839598 | UniProt:A0A178W3A8 | ProteinID:AAF79875.1 | ProteinID:AEE30778.1 | ArrayExpress:AT1G27090 |
| EnsemblPlantsGene:AT1G27090 | RefSeq:AT1G27090 | TAIR:AT1G27090 | RefSeq:AT1G27090-TAIR-G | EnsemblPlants:AT1G27090.1 | TAIR:AT1G27090.1 |
| EMBL:AY074367 | EMBL:AY091390 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| RefSeq:NP_174029.1 | ProteinID:OAP12626.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR37736 | UniProt:Q9LFX8 | UniParc:UPI00000A31BC | SEG:seg |
Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
Coordinates
chr1:-:9403753..9406369
Molecular Weight (calculated)
46020.9 Da
IEP (calculated)
5.042
GRAVY (calculated)
-0.825
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.