Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74755 | Soybean | nucleus | 64.86 | 64.57 |
| KRH69381 | Soybean | nucleus | 63.74 | 63.6 |
| AT1G27090.1 | Thale cress | nucleus | 55.63 | 58.81 |
| CDY46422 | Canola | nucleus | 51.35 | 56.44 |
| Bra016305.1-P | Field mustard | nucleus | 51.13 | 55.77 |
| CDY16217 | Canola | nucleus | 50.68 | 55.28 |
| KRH75984 | Soybean | cytosol | 26.35 | 55.19 |
| CDY14707 | Canola | nucleus | 50.68 | 53.96 |
| CDY52255 | Canola | nucleus | 49.77 | 53.77 |
| PGSC0003DMT400019928 | Potato | nucleus | 51.35 | 52.17 |
| Solyc01g010440.2.1 | Tomato | nucleus | 51.8 | 52.04 |
| GSMUA_Achr4P22310_001 | Banana | nucleus | 51.58 | 51.69 |
| HORVU7Hr1G119250.1 | Barley | cytosol | 12.39 | 51.4 |
| GSMUA_Achr4P17410_001 | Banana | nucleus | 39.41 | 48.88 |
| PGSC0003DMT400045462 | Potato | nucleus | 45.27 | 46.96 |
| HORVU3Hr1G093520.1 | Barley | cytosol | 6.76 | 44.78 |
| KRH74859 | Soybean | peroxisome | 36.94 | 44.32 |
| HORVU7Hr1G119330.1 | Barley | cytosol | 6.31 | 42.42 |
| HORVU4Hr1G004550.1 | Barley | cytosol | 6.08 | 40.91 |
| Zm00001d033549_P003 | Maize | mitochondrion, plasma membrane | 41.22 | 40.49 |
| HORVU1Hr1G071550.1 | Barley | cytosol | 5.86 | 39.39 |
| Os03t0688200-01 | Rice | plastid | 39.19 | 37.34 |
| EER93647 | Sorghum | plastid | 38.29 | 36.56 |
| TraesCS4B01G030200.1 | Wheat | cytosol | 9.68 | 36.13 |
| Zm00001d013528_P001 | Maize | plasma membrane | 36.49 | 35.45 |
| TraesCS4B01G029200.1 | Wheat | plastid | 36.49 | 35.45 |
| Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 26.13 | 35.26 |
| HORVU4Hr1G004410.3 | Barley | plastid | 34.68 | 34.45 |
| TraesCS4D01G027100.2 | Wheat | plastid | 35.81 | 34.27 |
| TraesCS4A01G283500.3 | Wheat | plastid | 35.14 | 33.33 |
| TraesCS6A01G179400.1 | Wheat | cytosol, nucleus, plasma membrane | 32.43 | 19.57 |
| TraesCS4B01G032400.1 | Wheat | cytosol | 26.35 | 16.86 |
| TraesCS7A01G186400.1 | Wheat | cytosol | 25.9 | 16.52 |
| TraesCS4A01G258800.2 | Wheat | cytosol | 29.5 | 16.17 |
| TraesCS4D01G030100.1 | Wheat | cytosol | 26.13 | 15.87 |
| TraesCS4A01G280000.1 | Wheat | cytosol | 20.5 | 14.75 |
| TraesCS3B01G283500.1 | Wheat | cytosol | 5.63 | 10.25 |
| TraesCS7A01G186200.1 | Wheat | cytosol | 8.78 | 10.0 |
| TraesCS4A01G280100.1 | Wheat | cytosol | 8.78 | 9.87 |
| TraesCS4D01G027500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 8.78 | 7.5 |
Protein Annotations
| ArrayExpress:VIT_01s0026g01470 | EMBL:FN596002 | EnsemblPlants:VIT_01s0026g01470.t01 | EnsemblPlantsGene:VIT_01s0026g01470 | EntrezGene:100248339 | EntrezGene:LOC100248339 |
| PANTHER:PTHR37736 | ProteinID:CCB56589 | ProteinID:CCB56589.1 | RefSeq:XP_002269144 | RefSeq:XP_002269144.1 | SEG:seg |
| TIGR:TC66375 | unigene:Vvi.12400 | UniParc:UPI00015CB23A | UniProt:F6HPG1 | wikigene:100248339 | wikigene:LOC100248339 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:10433684..10450063
Molecular Weight (calculated)
48675.4 Da
IEP (calculated)
4.970
GRAVY (calculated)
-0.756
Length
444 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASDVTDGP VLSLINKRLR GLRKKYNRIT QMEEAIAQGK PINKEQEDVL RSKPAVTVLI DELERLRQPL SAAVEEELSL ALQSNHLPPS PPPQPSSIIN
101: KDGADDGEEK PESDHLNVEN LLNLLYFGYL FDVKPQTDFT STMLTRTHER GCCLTYDYVT DDATDLLGER DLDLISQLSG LLISRPVDSS LSHKNALQRC
201: IEHARLWLAN SDRPIEPDAT VTYAGLREKL NKIMASDYFT TTPEMKAPVE VAAAAAAGNY VSFQVPLHSS VVPVQVEGSI AQYQQKDEDN SNVQGHETGD
301: DQSSPVEELH QDELEIENPA EVVSVQQEQA KQQAEVEWSQ GDVESKEQYV PRRNYQNTRG GRGGGGSGRR GGYPNGRGGR SGGRVGGSYQ NGRSQYYDQP
401: GNYYSRGYHN NRGRGGRGAG GNSYNNHVLG IQGGHAPTEV GLGS
101: KDGADDGEEK PESDHLNVEN LLNLLYFGYL FDVKPQTDFT STMLTRTHER GCCLTYDYVT DDATDLLGER DLDLISQLSG LLISRPVDSS LSHKNALQRC
201: IEHARLWLAN SDRPIEPDAT VTYAGLREKL NKIMASDYFT TTPEMKAPVE VAAAAAAGNY VSFQVPLHSS VVPVQVEGSI AQYQQKDEDN SNVQGHETGD
301: DQSSPVEELH QDELEIENPA EVVSVQQEQA KQQAEVEWSQ GDVESKEQYV PRRNYQNTRG GRGGGGSGRR GGYPNGRGGR SGGRVGGSYQ NGRSQYYDQP
401: GNYYSRGYHN NRGRGGRGAG GNSYNNHVLG IQGGHAPTEV GLGS
001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.