Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P22310_001 | Banana | nucleus | 74.58 | 60.27 |
| HORVU7Hr1G119250.1 | Barley | cytosol | 14.53 | 48.6 |
| KRH75984 | Soybean | cytosol | 24.58 | 41.51 |
| KRH74755 | Soybean | nucleus | 50.56 | 40.58 |
| KRH69381 | Soybean | nucleus | 49.72 | 40.0 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 48.88 | 39.41 |
| PGSC0003DMT400019928 | Potato | nucleus | 40.78 | 33.41 |
| Solyc01g010440.2.1 | Tomato | nucleus | 41.06 | 33.26 |
| KRH74859 | Soybean | peroxisome | 31.84 | 30.81 |
| Os03t0688200-01 | Rice | plastid | 39.39 | 30.26 |
| Zm00001d033549_P003 | Maize | mitochondrion, plasma membrane | 37.99 | 30.09 |
| Zm00001d013528_P001 | Maize | plasma membrane | 37.71 | 29.54 |
| PGSC0003DMT400045462 | Potato | nucleus | 34.64 | 28.97 |
| CDX90857 | Canola | nucleus | 10.34 | 28.68 |
| EER93647 | Sorghum | plastid | 36.31 | 27.96 |
| AT3G24690.1 | Thale cress | mitochondrion | 12.01 | 27.22 |
| TraesCS4B01G029200.1 | Wheat | plastid | 34.64 | 27.13 |
| HORVU4Hr1G004410.3 | Barley | plastid | 33.8 | 27.07 |
| Bra000790.1-P | Field mustard | nucleus | 9.5 | 26.56 |
| TraesCS4D01G027100.2 | Wheat | plastid | 34.08 | 26.29 |
| TraesCS4A01G283500.3 | Wheat | plastid | 34.08 | 26.07 |
| TraesCS4B01G030200.1 | Wheat | cytosol | 8.66 | 26.05 |
| CDY21298 | Canola | nucleus | 9.5 | 25.56 |
| Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 23.46 | 25.53 |
| CDX94550 | Canola | nucleus | 11.17 | 24.24 |
| Bra029489.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 10.61 | 23.6 |
| CDY16672 | Canola | cytosol, mitochondrion, nucleus, plastid | 10.61 | 23.6 |
| HORVU4Hr1G004550.1 | Barley | cytosol | 4.19 | 22.73 |
| HORVU3Hr1G093520.1 | Barley | cytosol | 3.63 | 19.4 |
| HORVU7Hr1G119330.1 | Barley | cytosol | 3.35 | 18.18 |
| TraesCS6A01G179400.1 | Wheat | cytosol, nucleus, plasma membrane | 32.68 | 15.9 |
| HORVU1Hr1G071550.1 | Barley | cytosol | 2.79 | 15.15 |
| TraesCS4B01G032400.1 | Wheat | cytosol | 28.49 | 14.7 |
| TraesCS7A01G186400.1 | Wheat | cytosol | 27.93 | 14.37 |
| TraesCS4D01G030100.1 | Wheat | cytosol | 29.05 | 14.23 |
| TraesCS4A01G258800.2 | Wheat | cytosol | 30.45 | 13.46 |
| TraesCS4A01G280000.1 | Wheat | cytosol | 22.35 | 12.97 |
| TraesCS3B01G283500.1 | Wheat | cytosol | 6.15 | 9.02 |
| TraesCS7A01G186200.1 | Wheat | cytosol | 7.82 | 7.18 |
| TraesCS4A01G280100.1 | Wheat | cytosol | 7.82 | 7.09 |
| TraesCS4D01G027500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 7.26 | 5.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P17410_001 | EnsemblPlants:GSMUA_Achr4T17410_001 | EnsemblPlantsGene:GSMUA_Achr4G17410_001 | PANTHER:PTHR37736 | SEG:seg | UniParc:UPI0002954FA1 |
| UniProt:M0SPQ4 | MapMan:35.2 | : | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G17410_001]
Coordinates
chr4:+:17141664..17147932
Molecular Weight (calculated)
39476.0 Da
IEP (calculated)
4.642
GRAVY (calculated)
-0.667
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MMASSGAEVV AAGDGPVLSL MSKRLRALRK KYNRILQMEE SLAQGKPLNK EQEEEPDLAV RDILTLLYFG CLFDVKPQSE FAATMLTRTH ERGCCLTYDY
101: VTDDAIELLG ERDLDAISAL GSLVTSRPVY SGVSHKNALE ACLQHAKHWL SSADQPLLTG TSITYAELRE KLNKILASDY FTTTPEMKAP GDVAAAVGKY
201: GVACQVPISE SMVAPSPVVQ TEGAPTPAPV SCQHKVDEQQ NQMEEVHPDR LVIDEPLKMD EPDKVSSLDA AFDQQEQQKQ EADVEDQNQR DTEQKEQQYI
301: SQSYRNQRGD IHGGDRGSGG RRGYSNGSGG RGDYQNGQGQ GQYYDSGFYP KNYYTTNA
101: VTDDAIELLG ERDLDAISAL GSLVTSRPVY SGVSHKNALE ACLQHAKHWL SSADQPLLTG TSITYAELRE KLNKILASDY FTTTPEMKAP GDVAAAVGKY
201: GVACQVPISE SMVAPSPVVQ TEGAPTPAPV SCQHKVDEQQ NQMEEVHPDR LVIDEPLKMD EPDKVSSLDA AFDQQEQQKQ EADVEDQNQR DTEQKEQQYI
301: SQSYRNQRGD IHGGDRGSGG RRGYSNGSGG RGDYQNGQGQ GQYYDSGFYP KNYYTTNA
001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.