Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
Predictors | GFP | MS/MS | Papers | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU7Hr1G119330.1 | Barley | cytosol | 77.61 | 78.79 |
HORVU1Hr1G071550.1 | Barley | cytosol | 73.13 | 74.24 |
HORVU4Hr1G004550.1 | Barley | cytosol | 50.75 | 51.52 |
CDX94550 | Canola | nucleus | 38.81 | 15.76 |
AT3G24690.1 | Thale cress | mitochondrion | 35.82 | 15.19 |
Bra029489.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 35.82 | 14.91 |
CDY16672 | Canola | cytosol, mitochondrion, nucleus, plastid | 35.82 | 14.91 |
HORVU4Hr1G004410.3 | Barley | plastid | 94.03 | 14.09 |
TraesCS4B01G029200.1 | Wheat | plastid | 88.06 | 12.91 |
TraesCS4D01G027100.2 | Wheat | plastid | 86.57 | 12.5 |
TraesCS4A01G283500.3 | Wheat | plastid | 86.57 | 12.39 |
EER93647 | Sorghum | plastid | 68.66 | 9.89 |
CDY21298 | Canola | nucleus | 19.4 | 9.77 |
Zm00001d033549_P003 | Maize | mitochondrion, plasma membrane | 64.18 | 9.51 |
Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 46.27 | 9.42 |
Zm00001d013528_P001 | Maize | plasma membrane | 64.18 | 9.41 |
CDX90857 | Canola | nucleus | 17.91 | 9.3 |
GSMUA_Achr4P22310_001 | Banana | nucleus | 47.76 | 7.22 |
Os03t0688200-01 | Rice | plastid | 47.76 | 6.87 |
KRH74859 | Soybean | peroxisome | 37.31 | 6.76 |
VIT_01s0026g01470.t01 | Wine grape | cytosol | 44.78 | 6.76 |
PGSC0003DMT400019928 | Potato | nucleus | 43.28 | 6.64 |
Solyc01g010440.2.1 | Tomato | nucleus | 43.28 | 6.56 |
HORVU7Hr1G119250.1 | Barley | cytosol | 10.45 | 6.54 |
KRH74755 | Soybean | nucleus | 43.28 | 6.5 |
PGSC0003DMT400045462 | Potato | nucleus | 40.3 | 6.31 |
KRH69381 | Soybean | nucleus | 41.79 | 6.29 |
Bra000790.1-P | Field mustard | nucleus | 11.94 | 6.25 |
GSMUA_Achr4P17410_001 | Banana | nucleus | 19.4 | 3.63 |
KRH75984 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
EnsemblPlants:HORVU3Hr1G093520.1 | EnsemblPlantsGene:HORVU3Hr1G093520 | PANTHER:PTHR37736 | SEG:seg | UniParc:UPI000B461A14 | UniProt:A0A287MBV3 |
MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:642781053..642781253
Molecular Weight (calculated)
6952.2 Da
IEP (calculated)
4.269
GRAVY (calculated)
-0.039
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: MEEAVAAGRT LNQEQKEVMR SKPTLAAVID ELERLHAPLV VAVAEEVSVS VPPAPAPSAS GSDSSVQ
001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.