CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013528_P001	Maize	plasma membrane	84.09	85.56
Zm00001d033549_P003	Maize	mitochondrion, plasma membrane	78.28	80.53
HORVU7Hr1G119250.1	Barley	cytosol	15.91	69.16
HORVU3Hr1G093520.1	Barley	cytosol	9.89	68.66
Os03t0688200-01	Rice	plastid	61.08	60.94
TraesCS4B01G029200.1	Wheat	plastid	59.78	60.83
HORVU4Hr1G004410.3	Barley	plastid	57.85	60.18
TraesCS4D01G027100.2	Wheat	plastid	59.57	59.7
TraesCS4A01G283500.3	Wheat	plastid	59.57	59.19
HORVU7Hr1G119330.1	Barley	cytosol	8.17	57.58
HORVU1Hr1G071550.1	Barley	cytosol	7.53	53.03
TraesCS4B01G030200.1	Wheat	cytosol	12.9	50.42
HORVU4Hr1G004550.1	Barley	cytosol	6.88	48.48
VIT_01s0026g01470.t01	Wine grape	cytosol	36.56	38.29
GSMUA_Achr4P22310_001	Banana	nucleus	35.7	37.47
AT3G24690.1	Thale cress	mitochondrion	12.47	36.71
GSMUA_Achr4P17410_001	Banana	nucleus	27.96	36.31
KRH74755	Soybean	nucleus	34.62	36.1
KRH69381	Soybean	nucleus	34.19	35.73
PGSC0003DMT400019928	Potato	nucleus	32.9	35.01
CDX90857	Canola	nucleus	9.68	34.88
CDY21298	Canola	nucleus	9.89	34.59
CDX94550	Canola	nucleus	12.26	34.55
Solyc01g010440.2.1	Tomato	nucleus	32.69	34.39
Bra029489.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	11.61	33.54
CDY16672	Canola	cytosol, mitochondrion, nucleus, plastid	11.61	33.54
PGSC0003DMT400045462	Potato	nucleus	30.32	32.94
Solyc05g006900.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	22.8	32.22
KRH74859	Soybean	peroxisome	24.52	30.81
Bra000790.1-P	Field mustard	nucleus	8.39	30.47
TraesCS6A01G179400.1	Wheat	cytosol, nucleus, plasma membrane	48.17	30.43
KRH75984	Soybean	cytosol	12.9	28.3
TraesCS4A01G258800.2	Wheat	cytosol	44.73	25.68
TraesCS7A01G186400.1	Wheat	cytosol	37.42	25.0
TraesCS4B01G032400.1	Wheat	cytosol	35.7	23.92
TraesCS4D01G030100.1	Wheat	cytosol	36.34	23.12
TraesCS4A01G280000.1	Wheat	cytosol	26.24	19.77
TraesCS3B01G283500.1	Wheat	cytosol	5.81	11.07
TraesCS4D01G027500.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	11.4	10.19
TraesCS7A01G186200.1	Wheat	cytosol	7.31	8.72
TraesCS4A01G280100.1	Wheat	cytosol	7.31	8.61

Protein Annotations

EnsemblPlants:EER93647	EnsemblPlantsGene:SORBI_3001G132900	EntrezGene:8054151	PANTHER:PTHR37736	ProteinID:EER93647	ProteinID:EER93647.1
RefSeq:XP_002466649.1	SEG:seg	unigene:Sbi.14714	UniParc:UPI0001A82998	UniProt:C5WPJ3	MapMan:35.2

Description

hypothetical protein

Coordinates

chr1:-:10471579..10477906

Molecular Weight (calculated)

48867.8 Da

IEP (calculated)

4.782

GRAVY (calculated)

-0.653

Length

465 amino acids

Sequence
(BLAST)

001: MATSPAASSS SAPTASAAAA ATMAAEATDG PVLSVVSKRL RALRKKYNRI TQMEESLAAG KTLNREQEEV LRSKPVVAAL IDELERLRPP LASAVAEELS
101: SRPAPAPAPA PAAAASSSDS DSSVQDLLAL IYFGSLFDVK QQSDFVSLVY ASELERSSCI TYDYVGDDPE DSLAETDLNA VSALASLAAS RPPAAAGVSH
201: RDALQACAHH ARLWLRRADE PIHPDSTVTY AGVRAKLDRI MASGYYTAQL EMRPPLDLAA AVASFGAGGA QMQESMVVSP QAPEAVEENP AVEGHKDEKD
301: DSQATEIYSD HQAPVVDAEH VEDEGLVNPT DEVPSAEAEQ ETFDADVEDQ EQKDQQFTQR RSYQNQRGGG GRGGGRRGYP NGRGGRGGRG GGYQNGRGGG
401: GYQNGRGGGG GYYYESGYYQ PRNYNNNRGR GGRSGGGNSY YNNHGGGAQG GGHGNPGRVE LGANA

Best Arabidopsis Sequence Match ( AT1G27090.1 )
(BLAST)

001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS

Arabidopsis Description

Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.