Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G186400.1 | Wheat | cytosol | 92.51 | 92.24 |
| TraesCS6A01G179400.1 | Wheat | cytosol, nucleus, plasma membrane | 76.37 | 72.01 |
| TraesCS4B01G030200.1 | Wheat | cytosol | 9.65 | 56.3 |
| TraesCS4B01G029200.1 | Wheat | plastid | 27.09 | 41.14 |
| Zm00001d033549_P003 | Maize | mitochondrion, plasma membrane | 23.49 | 36.06 |
| EER93647 | Sorghum | plastid | 23.92 | 35.7 |
| Zm00001d013528_P001 | Maize | plasma membrane | 23.34 | 35.45 |
| Os03t0688200-01 | Rice | plastid | 21.76 | 32.4 |
| AT3G24690.1 | Thale cress | mitochondrion | 7.2 | 31.65 |
| Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 14.7 | 31.0 |
| CDY21298 | Canola | nucleus | 5.76 | 30.08 |
| CDX90857 | Canola | nucleus | 5.48 | 29.46 |
| GSMUA_Achr4P17410_001 | Banana | nucleus | 14.7 | 28.49 |
| GSMUA_Achr4P22310_001 | Banana | nucleus | 17.87 | 27.99 |
| CDY16672 | Canola | cytosol, mitochondrion, nucleus, plastid | 6.48 | 27.95 |
| Bra029489.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 6.48 | 27.95 |
| CDX94550 | Canola | nucleus | 6.48 | 27.27 |
| KRH74859 | Soybean | peroxisome | 14.12 | 26.49 |
| KRH74755 | Soybean | nucleus | 17.0 | 26.46 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 16.86 | 26.35 |
| KRH69381 | Soybean | nucleus | 16.71 | 26.07 |
| Bra000790.1-P | Field mustard | nucleus | 4.61 | 25.0 |
| PGSC0003DMT400019928 | Potato | nucleus | 15.56 | 24.71 |
| Solyc01g010440.2.1 | Tomato | nucleus | 15.56 | 24.43 |
| KRH75984 | Soybean | cytosol | 7.35 | 24.06 |
| PGSC0003DMT400045462 | Potato | nucleus | 14.55 | 23.6 |
| TraesCS3B01G283500.1 | Wheat | cytosol | 6.92 | 19.67 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G032400.1 | EnsemblPlantsGene:TraesCS4B01G032400 | InterPro:DUF1618 | PANTHER:PTHR37736 | PFAM:PF07762 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:24064272..24067912
Molecular Weight (calculated)
77146.0 Da
IEP (calculated)
5.645
GRAVY (calculated)
-0.126
Length
694 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDHPSPCGR HPQILLDRRC LVGQLKNSTT AKSKNSKGVH LEVSFEAADP PAISLCLVSC VDQTGDRLAA QPRILGVTGG FVLLAITFSD SVNPYLRFID
101: YFVYKAGPDF ASLHLLARPY PSSFSPNLAA ILPVCDNSED FAVIFPHVEY FRLESRKHYT LHIYRSDTND WHSQVACIAE DDETRNARDK LLLHNTMSVA
201: YAEKGIIGWI DLWWGILLCN VLDKKPTIRF VPLPVPEPCD TSEFHLMFEN LTPRPHRHVT IFNDLIKCVE LDFHVQDAFC NMKRAKDYGW IAKTWTRSIY
301: SDVWCDGLTI DTSEISFTDS SLPNLLPGMF DEENNLTWKK LTSAGPTLSL LDDNVIYIMA KESMCHPTAY VLTVDTKSLK LESGAQCAPQ KTAWFEPTYE
401: PCVLFSSFGT TSELVKEFET KGTIFEIKEG PVLSVVSKRL RVLRKKQNRI AQMEESVAAG KMLNQEQKEL MHSKPVIAAL IDELERLRVP LSTALTQELS
501: TVPAPAAGSS SFGSDLSIQD LLALIYFGSL FYVKSPNEFI ATMVARKHER SSCITHGYVW DDTVDLLVEN DLDAVSAVAA LAAARPSSAD GVSHHDALQA
601: CVHHARLWLT RADAPIHPGS SVTYAAVRSK LDRIMASDYY TAPAVAGNHG AEGLQAQMSM TDSPEGPSLK EILAAENHKF VEQAMLAEED EWTT
101: YFVYKAGPDF ASLHLLARPY PSSFSPNLAA ILPVCDNSED FAVIFPHVEY FRLESRKHYT LHIYRSDTND WHSQVACIAE DDETRNARDK LLLHNTMSVA
201: YAEKGIIGWI DLWWGILLCN VLDKKPTIRF VPLPVPEPCD TSEFHLMFEN LTPRPHRHVT IFNDLIKCVE LDFHVQDAFC NMKRAKDYGW IAKTWTRSIY
301: SDVWCDGLTI DTSEISFTDS SLPNLLPGMF DEENNLTWKK LTSAGPTLSL LDDNVIYIMA KESMCHPTAY VLTVDTKSLK LESGAQCAPQ KTAWFEPTYE
401: PCVLFSSFGT TSELVKEFET KGTIFEIKEG PVLSVVSKRL RVLRKKQNRI AQMEESVAAG KMLNQEQKEL MHSKPVIAAL IDELERLRVP LSTALTQELS
501: TVPAPAAGSS SFGSDLSIQD LLALIYFGSL FYVKSPNEFI ATMVARKHER SSCITHGYVW DDTVDLLVEN DLDAVSAVAA LAAARPSSAD GVSHHDALQA
601: CVHHARLWLT RADAPIHPGS SVTYAAVRSK LDRIMASDYY TAPAVAGNHG AEGLQAQMSM TDSPEGPSLK EILAAENHKF VEQAMLAEED EWTT
001: MAAVEGQISA LISKRLRTLR KKYNRITDME ESISQGKTLN KEQEDTLRSK PIVSALIDEL VKLRIPPPSA AISEETSPPA KNKKQQKLSH ARKEVAEEEN
101: VTAKTDIEDC KISDDGINSE VSKDDTSPSS ESSQGVTPSP LSRKARRKRN AKKPQIPQ
101: VTAKTDIEDC KISDDGINSE VSKDDTSPSS ESSQGVTPSP LSRKARRKRN AKKPQIPQ
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT1G27090.1); Has 51 Blast hits to 50 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). [Source:TAIR;Acc:AT3G24690]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.