Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P17410_001 | Banana | nucleus | 60.27 | 74.58 |
| HORVU7Hr1G119250.1 | Barley | cytosol | 12.87 | 53.27 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 51.69 | 51.58 |
| KRH69381 | Soybean | nucleus | 50.56 | 50.34 |
| KRH74755 | Soybean | nucleus | 50.34 | 50.0 |
| HORVU3Hr1G093520.1 | Barley | cytosol | 7.22 | 47.76 |
| HORVU7Hr1G119330.1 | Barley | cytosol | 7.0 | 46.97 |
| HORVU1Hr1G071550.1 | Barley | cytosol | 6.77 | 45.45 |
| PGSC0003DMT400019928 | Potato | nucleus | 43.57 | 44.16 |
| Solyc01g010440.2.1 | Tomato | nucleus | 43.57 | 43.67 |
| HORVU4Hr1G004550.1 | Barley | cytosol | 6.32 | 42.42 |
| KRH75984 | Soybean | cytosol | 20.09 | 41.98 |
| Os03t0688200-01 | Rice | plastid | 41.99 | 39.91 |
| PGSC0003DMT400045462 | Potato | nucleus | 37.92 | 39.25 |
| TraesCS4B01G030200.1 | Wheat | cytosol | 10.38 | 38.66 |
| AT3G24690.1 | Thale cress | mitochondrion | 13.77 | 38.61 |
| KRH74859 | Soybean | peroxisome | 32.05 | 38.38 |
| Zm00001d033549_P003 | Maize | mitochondrion, plasma membrane | 38.83 | 38.05 |
| TraesCS4B01G029200.1 | Wheat | plastid | 38.15 | 36.98 |
| CDX90857 | Canola | nucleus | 10.61 | 36.43 |
| Zm00001d013528_P001 | Maize | plasma membrane | 37.47 | 36.32 |
| EER93647 | Sorghum | plastid | 37.47 | 35.7 |
| TraesCS4D01G027100.2 | Wheat | plastid | 37.25 | 35.56 |
| HORVU4Hr1G004410.3 | Barley | plastid | 35.44 | 35.12 |
| TraesCS4A01G283500.3 | Wheat | plastid | 37.02 | 35.04 |
| Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 24.83 | 33.43 |
| CDX94550 | Canola | nucleus | 12.42 | 33.33 |
| CDY21298 | Canola | nucleus | 9.93 | 33.08 |
| Bra029489.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 11.51 | 31.68 |
| CDY16672 | Canola | cytosol, mitochondrion, nucleus, plastid | 11.51 | 31.68 |
| Bra000790.1-P | Field mustard | nucleus | 8.8 | 30.47 |
| TraesCS6A01G179400.1 | Wheat | cytosol, nucleus, plasma membrane | 31.83 | 19.16 |
| TraesCS4B01G032400.1 | Wheat | cytosol | 27.99 | 17.87 |
| TraesCS7A01G186400.1 | Wheat | cytosol | 27.54 | 17.53 |
| TraesCS4A01G258800.2 | Wheat | cytosol | 31.38 | 17.16 |
| TraesCS4D01G030100.1 | Wheat | cytosol | 28.22 | 17.1 |
| TraesCS4A01G280000.1 | Wheat | cytosol | 21.9 | 15.72 |
| TraesCS3B01G283500.1 | Wheat | cytosol | 5.87 | 10.66 |
| TraesCS7A01G186200.1 | Wheat | cytosol | 8.13 | 9.23 |
| TraesCS4A01G280100.1 | Wheat | cytosol | 8.13 | 9.11 |
| TraesCS4D01G027500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 9.03 | 7.69 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P22310_001 | EnsemblPlants:GSMUA_Achr4T22310_001 | EnsemblPlantsGene:GSMUA_Achr4G22310_001 | ncoils:Coil | PANTHER:PTHR37736 | SEG:seg |
| UniParc:UPI0002951087 | UniProt:M0SR44 | MapMan:35.2 | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G22310_001]
Coordinates
chr4:-:22644078..22649895
Molecular Weight (calculated)
48356.1 Da
IEP (calculated)
4.816
GRAVY (calculated)
-0.753
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSGMEAAV DGPVQNLMSK RLRALRKKYN RILQMEESLA QGKPLNKEQE EVLRSKPAIT VLIDEYEKLR QPLAVAVQEE LARAAAASPP PPPAPQEEPT
101: AAPSADDDKE ELGPAVEDLL TLLYFGCLFD VKPQSEFAAT MLTRTHERGC CLTYDYVTDD ATDLLGEQDL DAISAIGSLV TSRPVYSGIS HKNALQVCLQ
201: HAKLWLLNVD QPIHPGSSVT YAGMREKLNK ILASDYFTTT PEMKAPGDVA AAVGKYGAAC QVQISESTTM PSPMVQTEDS SVPVGYQHKE DEQQEFREME
301: AHLDNEENLV DESLKMDEPD TGSPVDAASD QQDQQKLEVE MEEQNLRDTE KKEQHNPRRS YHNQRGATRG GGGSGGRRGY ANGRGGRGGG GGYQNGRSQY
401: YDSGYHPRNY YNARGRGGRS SGSAVYTNHG GHTSANVELD TSA
101: AAPSADDDKE ELGPAVEDLL TLLYFGCLFD VKPQSEFAAT MLTRTHERGC CLTYDYVTDD ATDLLGEQDL DAISAIGSLV TSRPVYSGIS HKNALQVCLQ
201: HAKLWLLNVD QPIHPGSSVT YAGMREKLNK ILASDYFTTT PEMKAPGDVA AAVGKYGAAC QVQISESTTM PSPMVQTEDS SVPVGYQHKE DEQQEFREME
301: AHLDNEENLV DESLKMDEPD TGSPVDAASD QQDQQKLEVE MEEQNLRDTE KKEQHNPRRS YHNQRGATRG GGGSGGRRGY ANGRGGRGGG GGYQNGRSQY
401: YDSGYHPRNY YNARGRGGRS SGSAVYTNHG GHTSANVELD TSA
001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.