Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G280100.1 | Wheat | cytosol | 94.87 | 93.67 |
| TraesCS3B01G283500.1 | Wheat | cytosol | 47.18 | 75.41 |
| AT3G24690.1 | Thale cress | mitochondrion | 4.62 | 11.39 |
| KRH69381 | Soybean | nucleus | 11.54 | 10.11 |
| KRH74755 | Soybean | nucleus | 11.28 | 9.87 |
| CDX94550 | Canola | nucleus | 3.85 | 9.09 |
| KRH74859 | Soybean | peroxisome | 8.46 | 8.92 |
| Os03t0688200-01 | Rice | plastid | 10.51 | 8.8 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 10.0 | 8.78 |
| CDY16672 | Canola | cytosol, mitochondrion, nucleus, plastid | 3.59 | 8.7 |
| Bra029489.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 3.59 | 8.7 |
| CDX90857 | Canola | nucleus | 2.82 | 8.53 |
| KRH75984 | Soybean | cytosol | 4.62 | 8.49 |
| TraesCS4A01G283500.3 | Wheat | plastid | 10.0 | 8.33 |
| Solyc01g010440.2.1 | Tomato | nucleus | 9.23 | 8.14 |
| GSMUA_Achr4P22310_001 | Banana | nucleus | 9.23 | 8.13 |
| PGSC0003DMT400019928 | Potato | nucleus | 8.97 | 8.01 |
| GSMUA_Achr4P17410_001 | Banana | nucleus | 7.18 | 7.82 |
| HORVU4Hr1G004550.1 | Barley | cytosol | 1.28 | 7.58 |
| Zm00001d033549_P003 | Maize | mitochondrion, plasma membrane | 8.72 | 7.52 |
| CDY21298 | Canola | nucleus | 2.56 | 7.52 |
| EER93647 | Sorghum | plastid | 8.72 | 7.31 |
| Zm00001d013528_P001 | Maize | plasma membrane | 8.46 | 7.22 |
| Bra000790.1-P | Field mustard | nucleus | 2.31 | 7.03 |
| PGSC0003DMT400045462 | Potato | nucleus | 7.69 | 7.01 |
| Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 5.9 | 6.99 |
| TraesCS7A01G186400.1 | Wheat | cytosol | 11.54 | 6.47 |
| TraesCS4A01G280000.1 | Wheat | cytosol | 8.97 | 5.67 |
| TraesCS4A01G258800.2 | Wheat | cytosol | 11.28 | 5.43 |
| TraesCS6A01G179400.1 | Wheat | cytosol, nucleus, plasma membrane | 7.69 | 4.08 |
| TraesCS4D01G027500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 4.87 | 3.65 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G186200.1 | EnsemblPlantsGene:TraesCS7A01G186200 | InterPro:DUF1618 | PANTHER:PTHR33074 | PFAM:PF07762 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:141048577..141049749
Molecular Weight (calculated)
44103.6 Da
IEP (calculated)
6.071
GRAVY (calculated)
-0.172
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMQDHPSPC GHHPGELKNS TTAKSKNSKG VHLEVSFEAV DPPAISLCLV SCVDQTGDRL TAPPRILGVT GGFVLLAITF SDSVNRYLRF IDYFVYKAGP
101: GFASLHLLAR PYPSSFSPNM AAILPVSDNS EDFAVIFPHV EYFRLESRKH YTHYTLHIYR SDTNDWHSQV ACIAEDNETR NARDKLLLHN TMSVAYAEKG
201: IIGWIDLWWG ILLCNVLDKK PTIRFVPLPV PEPCDTSEFH LMFENLTPRP HRHVTIFNDL IKCVELDFHL QDAFFNMKRA KDYGWMAKTW TRSIYSDVWC
301: DGLTIDTSEI SFTDSSLPNL LPGMFDEENN LTWKKLTSAG PTLSLLDDNV IYIMANENMC HPTAYVLTVD TKSLKLESGA QCAPEKTAWF
101: GFASLHLLAR PYPSSFSPNM AAILPVSDNS EDFAVIFPHV EYFRLESRKH YTHYTLHIYR SDTNDWHSQV ACIAEDNETR NARDKLLLHN TMSVAYAEKG
201: IIGWIDLWWG ILLCNVLDKK PTIRFVPLPV PEPCDTSEFH LMFENLTPRP HRHVTIFNDL IKCVELDFHL QDAFFNMKRA KDYGWMAKTW TRSIYSDVWC
301: DGLTIDTSEI SFTDSSLPNL LPGMFDEENN LTWKKLTSAG PTLSLLDDNV IYIMANENMC HPTAYVLTVD TKSLKLESGA QCAPEKTAWF
001: MYPLYKEVTR AFGTVAESKR VGAALNFFLY MLHSYVCGAF WYLSSIERKS TCWRAACART SDCNLTVTDL LCKRAGSDNI RFLNTSCPLI DPAQITNSTD
101: FDFGMYIDAL KSGVLEVKPK DFPRKFVYCF WWGLRNISAL GQNLETSNSA GEIFFAIIIC VSGLLLFAVL IGNVQKYLQS STTRVDEMEE KKRDTEKWMS
201: YREIPEYLKE RIRRFEDYKW RRTKGTEEEA LLRSLPKDLR LETKRYLFLK LLKKVPLLQA MDDQLLDALC ARLKTVHYTE KSYIVREGEP VEDMLFIMRG
301: NLISTTTYGG RTGFFNSVDL IAGDSCGDLL TWALYSLSSQ FPISSRTVQA LTEVEGFVIS ADDLKFVATQ YRRLHSKQLQ HMFRFYSLQW QTWAACFIQA
401: AWKRHCRRKL SKALREEEGK LHNTLQNDDS GGNKLNLGAA IYA
101: FDFGMYIDAL KSGVLEVKPK DFPRKFVYCF WWGLRNISAL GQNLETSNSA GEIFFAIIIC VSGLLLFAVL IGNVQKYLQS STTRVDEMEE KKRDTEKWMS
201: YREIPEYLKE RIRRFEDYKW RRTKGTEEEA LLRSLPKDLR LETKRYLFLK LLKKVPLLQA MDDQLLDALC ARLKTVHYTE KSYIVREGEP VEDMLFIMRG
301: NLISTTTYGG RTGFFNSVDL IAGDSCGDLL TWALYSLSSQ FPISSRTVQA LTEVEGFVIS ADDLKFVATQ YRRLHSKQLQ HMFRFYSLQW QTWAACFIQA
401: AWKRHCRRKL SKALREEEGK LHNTLQNDDS GGNKLNLGAA IYA
Arabidopsis Description
CNGC11Cyclic nucleotide-gated ion channel 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKD6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.