Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G030100.1 | Wheat | cytosol | 96.92 | 81.81 |
| TraesCS4A01G258800.2 | Wheat | cytosol | 97.89 | 74.57 |
| TraesCS7A01G186400.1 | Wheat | cytosol | 82.82 | 73.42 |
| TraesCS6A01G179400.1 | Wheat | cytosol, nucleus, plasma membrane | 67.1 | 56.25 |
| TraesCS4A01G283500.3 | Wheat | plastid | 23.01 | 30.34 |
| AT3G24690.1 | Thale cress | mitochondrion | 7.62 | 29.75 |
| Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 15.72 | 29.48 |
| Zm00001d033549_P003 | Maize | mitochondrion, plasma membrane | 19.94 | 27.21 |
| CDY21298 | Canola | nucleus | 5.83 | 27.07 |
| Zm00001d013528_P001 | Maize | plasma membrane | 19.77 | 26.7 |
| CDX90857 | Canola | nucleus | 5.51 | 26.36 |
| EER93647 | Sorghum | plastid | 19.77 | 26.24 |
| Bra029489.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 6.81 | 26.09 |
| CDY16672 | Canola | cytosol, mitochondrion, nucleus, plastid | 6.81 | 26.09 |
| CDX94550 | Canola | nucleus | 6.81 | 25.45 |
| Os03t0688200-01 | Rice | plastid | 18.64 | 24.68 |
| GSMUA_Achr4P17410_001 | Banana | nucleus | 12.97 | 22.35 |
| GSMUA_Achr4P22310_001 | Banana | nucleus | 15.72 | 21.9 |
| Bra000790.1-P | Field mustard | nucleus | 4.54 | 21.88 |
| KRH74755 | Soybean | nucleus | 15.56 | 21.52 |
| KRH74859 | Soybean | peroxisome | 12.64 | 21.08 |
| KRH69381 | Soybean | nucleus | 14.91 | 20.67 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 14.75 | 20.5 |
| PGSC0003DMT400019928 | Potato | nucleus | 13.61 | 19.22 |
| Solyc01g010440.2.1 | Tomato | nucleus | 13.61 | 19.0 |
| PGSC0003DMT400045462 | Potato | nucleus | 12.97 | 18.69 |
| KRH75984 | Soybean | cytosol | 5.19 | 15.09 |
| TraesCS4A01G280100.1 | Wheat | cytosol | 7.13 | 11.14 |
| TraesCS7A01G186200.1 | Wheat | cytosol | 5.67 | 8.97 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G280000.1 | EnsemblPlantsGene:TraesCS4A01G280000 | InterPro:DUF1618 | PANTHER:PTHR33074 | PFAM:PF07762 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:588584846..588586918
Molecular Weight (calculated)
68987.3 Da
IEP (calculated)
6.110
GRAVY (calculated)
-0.117
Length
617 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMQDHPSPC GRHPQILLDR NCLVGQLENS TTAKTKNSKG HHLELSFKAV DPPAISLCLV SCVDQTGELL PVDPRILGES GGSVLLAFTF FGSVHHLPFT
101: DYFVYKAGPN FPCLHLIPRP YPSSFEANLV AILPVNDNSE DFAVVFPHVE YFGLESRKHY TLHIYRSDAN DWHTQVAHIA EDNETRIAKR KLLLHDAMSV
201: AYAENGIIGW IDLWWGILLC NVLDKKPIIR FVPLPVPEPC DASEFHLTFE NLTPRPHRHV TIFNDLIKFV ELDFHVQDAF CNMKRGKDYG WMARTWSRSI
301: YSDIWHDGLT FDTSELSFSD SSLPNLLPEM FDDKNSLTWG NLTSAGPTLS LHDDNVIYIM AKESMCHRTA YVLAVNGKSL KLESCAPCSA ENMLWFEPTY
401: DPCVLFRSFG TTSESVKEFE TKGTISETKE GLALSVVSKR LRVLRKKQDR IAQMEESVAA GKVLNQDQKE VMHSKPTIAA LIDELERLRV PLSTALTKEL
501: STVPAPAAGS SSFGSDLSIQ DLLALVYFGS LFYVKSPDEF ITTMVARKHE RSSCITYGYV WDDTVDLLTE NDLDAVSAVA ALATARPASA VGVSHHDALQ
601: ACAHHARLWL TRADMLR
101: DYFVYKAGPN FPCLHLIPRP YPSSFEANLV AILPVNDNSE DFAVVFPHVE YFGLESRKHY TLHIYRSDAN DWHTQVAHIA EDNETRIAKR KLLLHDAMSV
201: AYAENGIIGW IDLWWGILLC NVLDKKPIIR FVPLPVPEPC DASEFHLTFE NLTPRPHRHV TIFNDLIKFV ELDFHVQDAF CNMKRGKDYG WMARTWSRSI
301: YSDIWHDGLT FDTSELSFSD SSLPNLLPEM FDDKNSLTWG NLTSAGPTLS LHDDNVIYIM AKESMCHRTA YVLAVNGKSL KLESCAPCSA ENMLWFEPTY
401: DPCVLFRSFG TTSESVKEFE TKGTISETKE GLALSVVSKR LRVLRKKQDR IAQMEESVAA GKVLNQDQKE VMHSKPTIAA LIDELERLRV PLSTALTKEL
501: STVPAPAAGS SSFGSDLSIQ DLLALVYFGS LFYVKSPDEF ITTMVARKHE RSSCITYGYV WDDTVDLLTE NDLDAVSAVA ALATARPASA VGVSHHDALQ
601: ACAHHARLWL TRADMLR
001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.