Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g010440.2.1 | Tomato | nucleus | 95.65 | 94.57 |
| PGSC0003DMT400045462 | Potato | nucleus | 60.87 | 62.15 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 52.17 | 51.35 |
| KRH74755 | Soybean | nucleus | 52.4 | 51.35 |
| KRH69381 | Soybean | nucleus | 51.95 | 51.01 |
| AT1G27090.1 | Thale cress | nucleus | 48.74 | 50.71 |
| CDY46422 | Canola | nucleus | 44.16 | 47.77 |
| CDY16217 | Canola | nucleus | 44.39 | 47.67 |
| HORVU7Hr1G119250.1 | Barley | cytosol | 11.67 | 47.66 |
| Bra016305.1-P | Field mustard | nucleus | 44.16 | 47.42 |
| CDY14707 | Canola | nucleus | 44.16 | 46.28 |
| HORVU4Hr1G004550.1 | Barley | cytosol | 6.86 | 45.45 |
| CDY52255 | Canola | nucleus | 42.56 | 45.26 |
| HORVU7Hr1G119330.1 | Barley | cytosol | 6.64 | 43.94 |
| GSMUA_Achr4P22310_001 | Banana | nucleus | 44.16 | 43.57 |
| HORVU3Hr1G093520.1 | Barley | cytosol | 6.64 | 43.28 |
| HORVU1Hr1G071550.1 | Barley | cytosol | 6.41 | 42.42 |
| GSMUA_Achr4P17410_001 | Banana | nucleus | 33.41 | 40.78 |
| KRH75984 | Soybean | cytosol | 19.45 | 40.09 |
| TraesCS4B01G030200.1 | Wheat | cytosol | 10.3 | 37.82 |
| KRH74859 | Soybean | peroxisome | 30.66 | 36.22 |
| Zm00001d033549_P003 | Maize | mitochondrion, plasma membrane | 36.84 | 35.62 |
| Zm00001d013528_P001 | Maize | plasma membrane | 35.24 | 33.7 |
| EER93647 | Sorghum | plastid | 35.01 | 32.9 |
| Os03t0688200-01 | Rice | plastid | 35.01 | 32.83 |
| HORVU4Hr1G004410.3 | Barley | plastid | 33.18 | 32.44 |
| TraesCS4B01G029200.1 | Wheat | plastid | 33.87 | 32.39 |
| TraesCS4D01G027100.2 | Wheat | plastid | 33.87 | 31.9 |
| TraesCS4A01G283500.3 | Wheat | plastid | 33.41 | 31.2 |
| TraesCS6A01G179400.1 | Wheat | cytosol, nucleus, plasma membrane | 30.66 | 18.21 |
| TraesCS7A01G186400.1 | Wheat | cytosol | 25.63 | 16.09 |
| TraesCS4D01G030100.1 | Wheat | cytosol | 26.32 | 15.73 |
| TraesCS4B01G032400.1 | Wheat | cytosol | 24.71 | 15.56 |
| TraesCS4A01G258800.2 | Wheat | cytosol | 28.38 | 15.31 |
| TraesCS4A01G280000.1 | Wheat | cytosol | 19.22 | 13.61 |
| TraesCS3B01G283500.1 | Wheat | cytosol | 5.95 | 10.66 |
| TraesCS7A01G186200.1 | Wheat | cytosol | 8.01 | 8.97 |
| TraesCS4A01G280100.1 | Wheat | cytosol | 8.01 | 8.86 |
| TraesCS4D01G027500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 9.15 | 7.69 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400019928 | EnsemblPlantsGene:PGSC0003DMG400007711 | EntrezGene:102597833 | PANTHER:PTHR37736 | PGSC:PGSC0003DMG400007711 | RefSeq:XP_006365138.1 |
| SEG:seg | UniParc:UPI00029665DC | UniProt:M1ACS9 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400007711]
Coordinates
chr1:+:43326833..43331399
Molecular Weight (calculated)
48380.2 Da
IEP (calculated)
4.810
GRAVY (calculated)
-0.712
Length
437 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTPVSELS DGPVLSVINK RLRALRKKHS RILQMEESRT KGKTLNKEQE ETLRSKSAVI AAIDELEKLR QPLAAAVVEE INLSTEQRQV SPAEFALDTA
101: IDSTNKGEPA REGVLEVEDL LNLLYFGSMF DVKSLQSDFT PTMLTRTMER ACCLSYDCMP DDESTDVMDL LGERDLDLIS MLSGLLVSRP VNSSLSHKHA
201: LQKCIEHAKL WLSKSEQPIE PNSDTTYAGL RSKLDKIIAS LYFTTDPVKV EAAAGKYGSY SVPVEEHVEA VTVDVPLQVD APSVQYEQKE EAVSSQAIET
301: NDIHISNNIE LQQGGQDINQ PAEPEEVVFE VEGIDNMKDT DFNEQQSVPR RSYQNQNYRG NRGGSVGDHR GYSNGRGGRG RGGSYQNGRN QYYDQSGNYQ
401: QRNYNNYRGR GGRGGGGGYN HYASGDQAGS YSASDLR
101: IDSTNKGEPA REGVLEVEDL LNLLYFGSMF DVKSLQSDFT PTMLTRTMER ACCLSYDCMP DDESTDVMDL LGERDLDLIS MLSGLLVSRP VNSSLSHKHA
201: LQKCIEHAKL WLSKSEQPIE PNSDTTYAGL RSKLDKIIAS LYFTTDPVKV EAAAGKYGSY SVPVEEHVEA VTVDVPLQVD APSVQYEQKE EAVSSQAIET
301: NDIHISNNIE LQQGGQDINQ PAEPEEVVFE VEGIDNMKDT DFNEQQSVPR RSYQNQNYRG NRGGSVGDHR GYSNGRGGRG RGGSYQNGRN QYYDQSGNYQ
401: QRNYNNYRGR GGRGGGGGYN HYASGDQAGS YSASDLR
001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.