Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G004410.3 | Barley | plastid | 91.59 | 21.92 |
| TraesCS4B01G029200.1 | Wheat | plastid | 89.72 | 21.01 |
| TraesCS4D01G027100.2 | Wheat | plastid | 90.65 | 20.91 |
| TraesCS4A01G283500.3 | Wheat | plastid | 90.65 | 20.73 |
| Zm00001d013528_P001 | Maize | plasma membrane | 70.09 | 16.41 |
| Zm00001d033549_P003 | Maize | mitochondrion, plasma membrane | 69.16 | 16.37 |
| EER93647 | Sorghum | plastid | 69.16 | 15.91 |
| Os03t0688200-01 | Rice | plastid | 66.36 | 15.24 |
| KRH75984 | Soybean | cytosol | 29.91 | 15.09 |
| GSMUA_Achr4P17410_001 | Banana | nucleus | 48.6 | 14.53 |
| KRH74859 | Soybean | peroxisome | 48.6 | 14.05 |
| Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 41.12 | 13.37 |
| GSMUA_Achr4P22310_001 | Banana | nucleus | 53.27 | 12.87 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 51.4 | 12.39 |
| KRH74755 | Soybean | nucleus | 51.4 | 12.33 |
| KRH69381 | Soybean | nucleus | 50.47 | 12.13 |
| PGSC0003DMT400019928 | Potato | nucleus | 47.66 | 11.67 |
| Solyc01g010440.2.1 | Tomato | nucleus | 47.66 | 11.54 |
| HORVU3Hr1G093520.1 | Barley | cytosol | 6.54 | 10.45 |
| PGSC0003DMT400045462 | Potato | nucleus | 39.25 | 9.81 |
| Bra000790.1-P | Field mustard | nucleus | 11.21 | 9.38 |
| CDY21298 | Canola | nucleus | 11.21 | 9.02 |
| CDX90857 | Canola | nucleus | 10.28 | 8.53 |
| AT3G24690.1 | Thale cress | mitochondrion | 12.15 | 8.23 |
| CDX94550 | Canola | nucleus | 11.21 | 7.27 |
| CDY16672 | Canola | cytosol, mitochondrion, nucleus, plastid | 10.28 | 6.83 |
| Bra029489.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 10.28 | 6.83 |
| HORVU4Hr1G004550.1 | Barley | cytosol | 3.74 | 6.06 |
| HORVU1Hr1G071550.1 | Barley | cytosol | 3.74 | 6.06 |
| HORVU7Hr1G119330.1 | Barley | cytosol | 2.8 | 4.55 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G119250.1 | EnsemblPlantsGene:HORVU7Hr1G119250 | PANTHER:PTHR37736 | SEG:seg | UniParc:UPI000B4742E8 | UniProt:A0A287XZA2 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:649363310..649363632
Molecular Weight (calculated)
11094.0 Da
IEP (calculated)
4.362
GRAVY (calculated)
0.315
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: VPAPAPSASG SDSSVQDLLA LVYFGALFDV KPQSDFIATM AAREHERSSC ITYDCVGDDT VDLLVEGDLD VVSAVAALAA ARPASAVGVS HRDALQACAH
101: HARLWLA
101: HARLWLA
001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.