Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G004550.1 | Barley | cytosol | 9.42 | 46.97 |
| HORVU3Hr1G093520.1 | Barley | cytosol | 9.42 | 46.27 |
| HORVU7Hr1G119330.1 | Barley | cytosol | 8.81 | 43.94 |
| PGSC0003DMT400045462 | Potato | nucleus | 57.14 | 43.93 |
| HORVU1Hr1G071550.1 | Barley | cytosol | 8.51 | 42.42 |
| TraesCS4B01G030200.1 | Wheat | cytosol | 15.2 | 42.02 |
| HORVU7Hr1G119250.1 | Barley | cytosol | 13.37 | 41.12 |
| Solyc01g010440.2.1 | Tomato | nucleus | 44.38 | 33.03 |
| AT1G27090.1 | Thale cress | nucleus | 34.65 | 27.14 |
| CDY16217 | Canola | nucleus | 32.52 | 26.29 |
| CDY46422 | Canola | nucleus | 32.22 | 26.24 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 35.26 | 26.13 |
| Bra016305.1-P | Field mustard | nucleus | 31.91 | 25.8 |
| KRH74755 | Soybean | nucleus | 34.95 | 25.78 |
| CDY52255 | Canola | nucleus | 31.91 | 25.55 |
| KRH69381 | Soybean | nucleus | 34.35 | 25.39 |
| CDY14707 | Canola | nucleus | 31.91 | 25.18 |
| GSMUA_Achr4P22310_001 | Banana | nucleus | 33.43 | 24.83 |
| KRH74859 | Soybean | peroxisome | 27.66 | 24.59 |
| GSMUA_Achr4P17410_001 | Banana | nucleus | 25.53 | 23.46 |
| Zm00001d033549_P003 | Maize | mitochondrion, plasma membrane | 31.91 | 23.23 |
| Os03t0688200-01 | Rice | plastid | 32.83 | 23.18 |
| EER93647 | Sorghum | plastid | 32.22 | 22.8 |
| Zm00001d013528_P001 | Maize | plasma membrane | 31.61 | 22.76 |
| HORVU4Hr1G004410.3 | Barley | plastid | 30.7 | 22.6 |
| TraesCS4B01G029200.1 | Wheat | plastid | 31.0 | 22.32 |
| TraesCS4D01G027100.2 | Wheat | plastid | 31.0 | 21.98 |
| TraesCS4A01G283500.3 | Wheat | plastid | 31.0 | 21.79 |
| KRH75984 | Soybean | cytosol | 13.37 | 20.75 |
| TraesCS4A01G280000.1 | Wheat | cytosol | 29.48 | 15.72 |
| TraesCS7A01G186400.1 | Wheat | cytosol | 31.31 | 14.8 |
| TraesCS4B01G032400.1 | Wheat | cytosol | 31.0 | 14.7 |
| TraesCS6A01G179400.1 | Wheat | cytosol, nucleus, plasma membrane | 31.0 | 13.86 |
| TraesCS4D01G030100.1 | Wheat | cytosol | 30.09 | 13.54 |
| TraesCS4A01G258800.2 | Wheat | cytosol | 30.09 | 12.22 |
| TraesCS4D01G027500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 16.72 | 10.58 |
| TraesCS3B01G283500.1 | Wheat | cytosol | 6.69 | 9.02 |
| TraesCS7A01G186200.1 | Wheat | cytosol | 6.99 | 5.9 |
| TraesCS4A01G280100.1 | Wheat | cytosol | 6.99 | 5.82 |
Protein Annotations
| EnsemblPlants:Solyc05g006900.1.1 | EnsemblPlantsGene:Solyc05g006900.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR37736 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000276589A | UniProt:K4BWL6 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5:-:1498699..1500117
Molecular Weight (calculated)
37208.1 Da
IEP (calculated)
7.586
GRAVY (calculated)
-0.196
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQSNLNKLD ELYFYGVILP SAVLLAHFHF IPKKKIKKNN FCYLRGKWKN QSTLSRTPKF FLLKLQVFPP LHFTSQTLHN SAVHGGGIIP SVSPRLLYFH
101: LPMEATAASE TSDGPVLNVI NKRLRALRKK YNRILQMEES LANGKTLNKE QEETFRSKPS VVAAIDELEK LRQPLAAAVT EEINLATQHH LVSAADSPDE
201: KLAGKGDNSC VEVEDLLNII YFGSMFAHAN WGKNDFVSTM WKRAMHERAC CLNYDCMPED ESTDVIDMLS EKDLDLISML SELLICRPVN STLSHKHALQ
301: ACIEHAKLWI TKSDQLIVPE SDATCRMLV
101: LPMEATAASE TSDGPVLNVI NKRLRALRKK YNRILQMEES LANGKTLNKE QEETFRSKPS VVAAIDELEK LRQPLAAAVT EEINLATQHH LVSAADSPDE
201: KLAGKGDNSC VEVEDLLNII YFGSMFAHAN WGKNDFVSTM WKRAMHERAC CLNYDCMPED ESTDVIDMLS EKDLDLISML SELLICRPVN STLSHKHALQ
301: ACIEHAKLWI TKSDQLIVPE SDATCRMLV
001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.