Factsheet for TraesCS4A01G283500.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G027100.2	Wheat	plastid	97.22	98.06
TraesCS4B01G029200.1	Wheat	plastid	90.38	92.56
HORVU7Hr1G119250.1	Barley	cytosol	20.73	90.65
HORVU3Hr1G093520.1	Barley	cytosol	12.39	86.57
HORVU4Hr1G004410.3	Barley	plastid	80.56	84.34
HORVU7Hr1G119330.1	Barley	cytosol	10.68	75.76
HORVU1Hr1G071550.1	Barley	cytosol	10.26	72.73
EER93647	Sorghum	plastid	59.19	59.57
Zm00001d013528_P001	Maize	plasma membrane	55.98	57.33
Os03t0688200-01	Rice	plastid	56.41	56.65
Zm00001d033549_P003	Maize	mitochondrion, plasma membrane	53.42	55.31
TraesCS6A01G179400.1	Wheat	cytosol, nucleus, plasma membrane	59.62	37.91
GSMUA_Achr4P22310_001	Banana	nucleus	35.04	37.02
KRH69381	Soybean	nucleus	33.97	35.73
KRH74755	Soybean	nucleus	33.97	35.65
VIT_01s0026g01470.t01	Wine grape	cytosol	33.33	35.14
GSMUA_Achr4P17410_001	Banana	nucleus	26.07	34.08
Solyc01g010440.2.1	Tomato	nucleus	31.62	33.48
PGSC0003DMT400019928	Potato	nucleus	31.2	33.41
TraesCS4A01G258800.2	Wheat	cytosol	57.48	33.21
PGSC0003DMT400045462	Potato	nucleus	29.06	31.78
AT3G24690.1	Thale cress	mitochondrion	10.68	31.65
Solyc05g006900.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	21.79	31.0
CDY21298	Canola	nucleus	8.33	29.32
CDX90857	Canola	nucleus	7.91	28.68
CDY16672	Canola	cytosol, mitochondrion, nucleus, plastid	9.83	28.57
Bra029489.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	9.83	28.57
CDX94550	Canola	nucleus	10.04	28.48
TraesCS7A01G186400.1	Wheat	cytosol	42.09	28.3
KRH74859	Soybean	peroxisome	22.01	27.84
KRH75984	Soybean	cytosol	12.61	27.83
Bra000790.1-P	Field mustard	nucleus	6.84	25.0
TraesCS4A01G280000.1	Wheat	cytosol	30.34	23.01
TraesCS7A01G186200.1	Wheat	cytosol	8.33	10.0
TraesCS4A01G280100.1	Wheat	cytosol	8.33	9.87

Protein Annotations

EnsemblPlants:TraesCS4A01G283500.3

EnsemblPlantsGene:TraesCS4A01G283500

SEG:seg

MapMan:35.2

Description

No Description!

Coordinates

chr4A:-:590498345..590502911

Molecular Weight (calculated)

49041.9 Da

IEP (calculated)

4.916

GRAVY (calculated)

-0.710

Length

468 amino acids

Sequence
(BLAST)

001: MAASPTASAS GSAAAAAAAA SEANDGPTLS VVTKRLRALR KKQNRIAQME EAVAAGKTLN QEQKEVMRSK PTLAAVIDEL ERLRAPLAVA VAEEVAVAPA
101: PAPAPAPEPS GSDSSVQDLL ALVYFGALFD VKPQSDFIAT MVAREHERSS CITYDCVGDD TVDLLVEGDL DVVSAVAALA AARPASAVGV SHRDALQACA
201: HHARLWLARA DEPIHPGSSV TYAAVRAKLD RIMASDYYTA AAVGGGSYGA EGVQAQESMT ASPEASAVEE NLAAEDHKEE KEDSHATEIY NDHQSDSADV
301: QNVFQDREAP VNPPEEYPSV QAEQEKFDME EQDERDAEPK EQQFQHPRRS HQNQRGGGRG RRGAYPNGRG GRGGGRGMGG GYQNGRGYQG GGGGYQGGGG
401: GYQNGRGGGG GYYNNNNNEE GYYQPRNFNN NRGRGGRSGG GNSYYGNQGG GGAQGGGHAY AERVEANA

Best Arabidopsis Sequence Match ( AT1G27090.1 )
(BLAST)

001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS

Arabidopsis Description

Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.