Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400019928 | Potato | nucleus | 62.15 | 60.87 |
| Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 43.93 | 57.14 |
| KRH74755 | Soybean | nucleus | 48.36 | 46.41 |
| KRH69381 | Soybean | nucleus | 47.66 | 45.84 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 46.96 | 45.27 |
| AT1G27090.1 | Thale cress | nucleus | 43.93 | 44.76 |
| HORVU4Hr1G004550.1 | Barley | cytosol | 6.78 | 43.94 |
| CDY16217 | Canola | nucleus | 40.65 | 42.75 |
| CDY46422 | Canola | nucleus | 40.19 | 42.57 |
| Bra016305.1-P | Field mustard | nucleus | 40.19 | 42.26 |
| CDY14707 | Canola | nucleus | 40.19 | 41.25 |
| HORVU7Hr1G119330.1 | Barley | cytosol | 6.31 | 40.91 |
| CDY52255 | Canola | nucleus | 39.02 | 40.63 |
| HORVU3Hr1G093520.1 | Barley | cytosol | 6.31 | 40.3 |
| HORVU1Hr1G071550.1 | Barley | cytosol | 6.07 | 39.39 |
| HORVU7Hr1G119250.1 | Barley | cytosol | 9.81 | 39.25 |
| KRH75984 | Soybean | cytosol | 18.93 | 38.21 |
| GSMUA_Achr4P22310_001 | Banana | nucleus | 39.25 | 37.92 |
| TraesCS4B01G030200.1 | Wheat | cytosol | 10.51 | 37.82 |
| GSMUA_Achr4P17410_001 | Banana | nucleus | 28.97 | 34.64 |
| KRH74859 | Soybean | peroxisome | 29.21 | 33.78 |
| Zm00001d033549_P003 | Maize | mitochondrion, plasma membrane | 35.51 | 33.63 |
| Os03t0688200-01 | Rice | plastid | 34.58 | 31.76 |
| TraesCS4B01G029200.1 | Wheat | plastid | 32.71 | 30.63 |
| EER93647 | Sorghum | plastid | 32.94 | 30.32 |
| Zm00001d013528_P001 | Maize | plasma membrane | 32.01 | 29.98 |
| HORVU4Hr1G004410.3 | Barley | plastid | 31.31 | 29.98 |
| TraesCS4D01G027100.2 | Wheat | plastid | 32.01 | 29.53 |
| TraesCS4A01G283500.3 | Wheat | plastid | 31.78 | 29.06 |
| TraesCS6A01G179400.1 | Wheat | cytosol, nucleus, plasma membrane | 29.91 | 17.39 |
| TraesCS7A01G186400.1 | Wheat | cytosol | 25.0 | 15.37 |
| TraesCS4A01G258800.2 | Wheat | cytosol | 27.57 | 14.57 |
| TraesCS4B01G032400.1 | Wheat | cytosol | 23.6 | 14.55 |
| TraesCS4D01G030100.1 | Wheat | cytosol | 24.53 | 14.36 |
| TraesCS4A01G280000.1 | Wheat | cytosol | 18.69 | 12.97 |
| TraesCS3B01G283500.1 | Wheat | cytosol | 4.91 | 8.61 |
| TraesCS4D01G027500.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 9.81 | 8.08 |
| TraesCS7A01G186200.1 | Wheat | cytosol | 7.01 | 7.69 |
| TraesCS4A01G280100.1 | Wheat | cytosol | 6.54 | 7.09 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400045462 | EnsemblPlantsGene:PGSC0003DMG400017635 | EntrezGene:102594597 | PANTHER:PTHR37736 | PGSC:PGSC0003DMG400017635 | RefSeq:XP_006357249.1 |
| SEG:seg | UniParc:UPI000296623B | UniProt:M1BHP4 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400017635]
Coordinates
chr5:+:6150420..6156917
Molecular Weight (calculated)
48079.5 Da
IEP (calculated)
5.168
GRAVY (calculated)
-0.860
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MEATAASETS DGPVLNVINK RLRALRKKHN RILQMEESLA NGKTLNKEQE ETFRSKTSVV VAIDELEKLR QPLAAAVTEE INLATQHHLV SAADSPDEKL
101: AGKGDNSCGE VEDLLNIIYF GSMFAHANWG KNDFVSTMWK RAMHERACCL NYDCMPEDES TDVMDMLSEK DLDLISMLSE LLICRPVNST LSHKHALQAC
201: FEHAKLWITK SDQHIVPESD ATYAGLRSKL NKIMSSLYFT TEPVFRVEQD VAEYESYQVP VEETVLPVNA TGQVESPVER YQEKEGEHVN SQADKSREIH
301: DSSATDLHQE ENLSEQRAEP EEVGHEGEGV EDPKDANVDN QQSVPRRSNQ HFRGNRGGGR RGYNNGRGGR GRGRSYYDDH NLYYDQPGNY YPRNYPNYRG
401: RGGRGSRGDG NYSHYASGDQ AGNVPAFS
101: AGKGDNSCGE VEDLLNIIYF GSMFAHANWG KNDFVSTMWK RAMHERACCL NYDCMPEDES TDVMDMLSEK DLDLISMLSE LLICRPVNST LSHKHALQAC
201: FEHAKLWITK SDQHIVPESD ATYAGLRSKL NKIMSSLYFT TEPVFRVEQD VAEYESYQVP VEETVLPVNA TGQVESPVER YQEKEGEHVN SQADKSREIH
301: DSSATDLHQE ENLSEQRAEP EEVGHEGEGV EDPKDANVDN QQSVPRRSNQ HFRGNRGGGR RGYNNGRGGR GRGRSYYDDH NLYYDQPGNY YPRNYPNYRG
401: RGGRGSRGDG NYSHYASGDQ AGNVPAFS
001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.