Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16217 | Canola | nucleus | 94.24 | 96.56 |
| CDY46422 | Canola | nucleus | 86.09 | 88.86 |
| CDY52255 | Canola | nucleus | 86.57 | 87.83 |
| AT1G27090.1 | Thale cress | nucleus | 71.46 | 70.95 |
| KRH69381 | Soybean | nucleus | 54.92 | 51.46 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 53.96 | 50.68 |
| KRH74755 | Soybean | nucleus | 53.72 | 50.22 |
| Solyc01g010440.2.1 | Tomato | nucleus | 47.0 | 44.34 |
| PGSC0003DMT400019928 | Potato | nucleus | 46.28 | 44.16 |
| KRH75984 | Soybean | cytosol | 21.58 | 42.45 |
| CDX90857 | Canola | nucleus | 12.95 | 41.86 |
| PGSC0003DMT400045462 | Potato | nucleus | 41.25 | 40.19 |
| CDY21298 | Canola | nucleus | 12.71 | 39.85 |
| KRH74859 | Soybean | peroxisome | 32.85 | 37.03 |
| CDX94550 | Canola | nucleus | 14.15 | 35.76 |
| CDY16672 | Canola | cytosol, mitochondrion, nucleus, plastid | 13.43 | 34.78 |
| Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 25.18 | 31.91 |
Protein Annotations
| EnsemblPlants:CDY14707 | EnsemblPlantsGene:GSBRNA2T00084514001 | PANTHER:PTHR37736 | ProteinID:CDY14707 | ProteinID:CDY14707.1 | SEG:seg |
| UniParc:UPI0004EF21A0 | UniProt:A0A078FPB2 | MapMan:35.2 | : | : | : |
Description
BnaC05g19640DBnaC05g19640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPB2]
Coordinates
chrLK032046:+:453713..456088
Molecular Weight (calculated)
45635.7 Da
IEP (calculated)
5.921
GRAVY (calculated)
-0.824
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTATATAT ATSSSDASEG PVMGLINKRL RALRKKLNRI TQMEESISQG KTLNKEQQEV LRSKPSVLVL IEELDKLRAP LSAAVSEEIT LATTHHLHHH
101: NQAPPDQNEV ADAPEEEEAK KLEDLVNLLY FGSLFDVKSQ NELASIMLTR THERGCCLVY DTVTDESTDL LCDKDLDLIS ELWTMMVSRP ADSFLSHKNA
201: LERCVEHAKL WLANSNQPIA SNCNVSYAGL REKLKKIMGS NYFTITPEMV APVEAASAAA AGNYGAFQVA ADTEQKEEDA SNIKEQEPAV NDQSEQPKDE
301: SVTEGELVQG QQEQGYTQVE GGRSKRDYQQ QYVPRGTHQN QRGHRGARRG HSNAPRGGRG GGGGYSNGRY ESYDNSGGNG YQRSHYNNRG RGRGGGGGNG
401: HSYNNNNNQD SNVTVAS
101: NQAPPDQNEV ADAPEEEEAK KLEDLVNLLY FGSLFDVKSQ NELASIMLTR THERGCCLVY DTVTDESTDL LCDKDLDLIS ELWTMMVSRP ADSFLSHKNA
201: LERCVEHAKL WLANSNQPIA SNCNVSYAGL REKLKKIMGS NYFTITPEMV APVEAASAAA AGNYGAFQVA ADTEQKEEDA SNIKEQEPAV NDQSEQPKDE
301: SVTEGELVQG QQEQGYTQVE GGRSKRDYQQ QYVPRGTHQN QRGHRGARRG HSNAPRGGRG GGGGYSNGRY ESYDNSGGNG YQRSHYNNRG RGRGGGGGNG
401: HSYNNNNNQD SNVTVAS
001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.