Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46422 | Canola | nucleus | 93.19 | 94.8 |
| CDY16217 | Canola | nucleus | 87.59 | 88.45 |
| CDY14707 | Canola | nucleus | 87.83 | 86.57 |
| AT1G27090.1 | Thale cress | nucleus | 70.07 | 68.57 |
| KRH69381 | Soybean | nucleus | 54.5 | 50.34 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 53.77 | 49.77 |
| KRH74755 | Soybean | nucleus | 53.77 | 49.55 |
| PGSC0003DMT400019928 | Potato | nucleus | 45.26 | 42.56 |
| Solyc01g010440.2.1 | Tomato | nucleus | 45.74 | 42.53 |
| KRH75984 | Soybean | cytosol | 21.41 | 41.51 |
| CDX90857 | Canola | nucleus | 12.65 | 40.31 |
| PGSC0003DMT400045462 | Potato | nucleus | 40.63 | 39.02 |
| CDY21298 | Canola | nucleus | 12.41 | 38.35 |
| CDX94550 | Canola | nucleus | 14.36 | 35.76 |
| KRH74859 | Soybean | peroxisome | 31.87 | 35.41 |
| CDY16672 | Canola | cytosol, mitochondrion, nucleus, plastid | 13.63 | 34.78 |
| Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 25.55 | 31.91 |
Protein Annotations
| EnsemblPlants:CDY52255 | EnsemblPlantsGene:GSBRNA2T00005232001 | PANTHER:PTHR37736 | ProteinID:CDY52255 | ProteinID:CDY52255.1 | SEG:seg |
| UniParc:UPI0004EEE1AA | UniProt:A0A078IME2 | MapMan:35.2 | : | : | : |
Description
BnaC08g20270DBnaC08g20270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IME2]
Coordinates
chrLK033071:+:47312..49449
Molecular Weight (calculated)
45347.4 Da
IEP (calculated)
5.496
GRAVY (calculated)
-0.822
Length
411 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTTATSDA GEGPVMALIN KRLRALRKKL NRIAQMEESI SQGKTLNKEQ QEVLRSKPSV LVLIEELDKL RNPLSNAVSE EIALATTHHN APSSDQNTTV
101: AVAPEEKEKE KEVEKLEDLV NLLYFGSLFD VKSQNELASI MMTRTHERGC CLVYDTVTDE STADLLCDKD LDLISRLWSM MVSRPADSSL SHKNALERCV
201: EHAKLWLANS DQPIASNCEV SYATLREKVK KIMGSNYFTI TPEMVVAPVE ATAEAGSYGS FQVAADSEQK EEDASNFKEQ ESYVNDQSEQ PKDESVVTEG
301: EVVQGQQEQG YTQVEGGRSK RDYQQQQYVP RGFHQNQRGH RGARRGHSNA PLGGRGGGGG YSNGRYESYD NSGGNGYQRS HYNNRGRGRG GGGNGHSYNN
401: NHQDSDVSVA S
101: AVAPEEKEKE KEVEKLEDLV NLLYFGSLFD VKSQNELASI MMTRTHERGC CLVYDTVTDE STADLLCDKD LDLISRLWSM MVSRPADSSL SHKNALERCV
201: EHAKLWLANS DQPIASNCEV SYATLREKVK KIMGSNYFTI TPEMVVAPVE ATAEAGSYGS FQVAADSEQK EEDASNFKEQ ESYVNDQSEQ PKDESVVTEG
301: EVVQGQQEQG YTQVEGGRSK RDYQQQQYVP RGFHQNQRGH RGARRGHSNA PLGGRGGGGG YSNGRYESYD NSGGNGYQRS HYNNRGRGRG GGGNGHSYNN
401: NHQDSDVSVA S
001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS
Arabidopsis Description
Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.