Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G032400.1 | Wheat | cytosol | 92.24 | 92.51 |
| TraesCS4A01G280000.1 | Wheat | cytosol | 73.42 | 82.82 |
| TraesCS6A01G179400.1 | Wheat | cytosol, nucleus, plasma membrane | 78.02 | 73.78 |
| TraesCS4A01G258800.2 | Wheat | cytosol | 81.47 | 70.0 |
| TraesCS4A01G283500.3 | Wheat | plastid | 28.3 | 42.09 |
| Zm00001d033549_P003 | Maize | mitochondrion, plasma membrane | 24.43 | 37.61 |
| EER93647 | Sorghum | plastid | 25.0 | 37.42 |
| Zm00001d013528_P001 | Maize | plasma membrane | 23.99 | 36.54 |
| Os03t0688200-01 | Rice | plastid | 21.98 | 32.83 |
| AT3G24690.1 | Thale cress | mitochondrion | 7.18 | 31.65 |
| Solyc05g006900.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 14.8 | 31.31 |
| CDY21298 | Canola | nucleus | 5.75 | 30.08 |
| CDX90857 | Canola | nucleus | 5.46 | 29.46 |
| Bra029489.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 6.47 | 27.95 |
| CDY16672 | Canola | cytosol, mitochondrion, nucleus, plastid | 6.47 | 27.95 |
| GSMUA_Achr4P17410_001 | Banana | nucleus | 14.37 | 27.93 |
| GSMUA_Achr4P22310_001 | Banana | nucleus | 17.53 | 27.54 |
| CDX94550 | Canola | nucleus | 6.47 | 27.27 |
| KRH74859 | Soybean | peroxisome | 13.94 | 26.22 |
| VIT_01s0026g01470.t01 | Wine grape | cytosol | 16.52 | 25.9 |
| KRH74755 | Soybean | nucleus | 16.52 | 25.78 |
| PGSC0003DMT400019928 | Potato | nucleus | 16.09 | 25.63 |
| Solyc01g010440.2.1 | Tomato | nucleus | 16.24 | 25.57 |
| KRH69381 | Soybean | nucleus | 16.09 | 25.17 |
| PGSC0003DMT400045462 | Potato | nucleus | 15.37 | 25.0 |
| Bra000790.1-P | Field mustard | nucleus | 4.6 | 25.0 |
| KRH75984 | Soybean | cytosol | 7.18 | 23.58 |
| TraesCS4A01G280100.1 | Wheat | cytosol | 8.05 | 14.18 |
| TraesCS7A01G186200.1 | Wheat | cytosol | 6.47 | 11.54 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G186400.1 | EnsemblPlantsGene:TraesCS7A01G186400 | InterPro:DUF1618 | PANTHER:PTHR37736 | PFAM:PF07762 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:141303350..141308972
Molecular Weight (calculated)
77408.9 Da
IEP (calculated)
5.369
GRAVY (calculated)
-0.181
Length
696 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMQDHPSPC GHHPQILLDK KCLVGELKNS TTAKSKNSKG VHLEVSFEAV DPPAISLCLV SCVDQTGDRL TAPPRILGVT GGFVLLAITF SDSVNRYLFI
101: DYFVYKAGPD FASLHLLARP YPSSFSPNMA AILPVSDNSE DFAVIFPHVE YFRLESREHY TLHIYRSDTN DWHSQVACIA EDNETRNARD KLLLHNTMSV
201: AYAEKGIIGW IDLWWGILLC NVLDKKPTIR FVPLPVPEPC DTSEFHLMFE NLTPRPHRHV TIFNDLIKCV ELDFHVQDAF FNMKRAKDYG WMAKTWTRSI
301: YSDVWCDGLT IDTSEISFTD SSLPNLLPGM FDEENNLTWK KLTSARPTLS LLDDNVIYIM ANESMCHPTA YVLTVDTKSL KLESGAQCAP QKTAWFEPTY
401: EPCVLFSSFG TTSELVKEFE TKGTIFEIKE GPVLSVVSKR LRVLRKKQNR IAQMEESVAA GKMLNQEQKE LMHSKPVIAA LIDELERLRV PLSTALTKEL
501: STVPAPAAGS SSFGSDLSIQ DLLALIYFGS LFYVKSPNEF IATMVARKNE RSSCITHGYV WDDTVDLLVE NDLDAVSAVA ALAATRPSSA DGVSHHDALQ
601: ACAHHARLWL TRADAPIHPG SSVTYAAVRS KLDRIMASDY YTAPAVAGNH GAEGLQAQMS MTDSPEAPSL KETLAAENHK EDEEDSSHAT EIDNDH
101: DYFVYKAGPD FASLHLLARP YPSSFSPNMA AILPVSDNSE DFAVIFPHVE YFRLESREHY TLHIYRSDTN DWHSQVACIA EDNETRNARD KLLLHNTMSV
201: AYAEKGIIGW IDLWWGILLC NVLDKKPTIR FVPLPVPEPC DTSEFHLMFE NLTPRPHRHV TIFNDLIKCV ELDFHVQDAF FNMKRAKDYG WMAKTWTRSI
301: YSDVWCDGLT IDTSEISFTD SSLPNLLPGM FDEENNLTWK KLTSARPTLS LLDDNVIYIM ANESMCHPTA YVLTVDTKSL KLESGAQCAP QKTAWFEPTY
401: EPCVLFSSFG TTSELVKEFE TKGTIFEIKE GPVLSVVSKR LRVLRKKQNR IAQMEESVAA GKMLNQEQKE LMHSKPVIAA LIDELERLRV PLSTALTKEL
501: STVPAPAAGS SSFGSDLSIQ DLLALIYFGS LFYVKSPNEF IATMVARKNE RSSCITHGYV WDDTVDLLVE NDLDAVSAVA ALAATRPSSA DGVSHHDALQ
601: ACAHHARLWL TRADAPIHPG SSVTYAAVRS KLDRIMASDY YTAPAVAGNH GAEGLQAQMS MTDSPEAPSL KETLAAENHK EDEEDSSHAT EIDNDH
001: MAAVEGQISA LISKRLRTLR KKYNRITDME ESISQGKTLN KEQEDTLRSK PIVSALIDEL VKLRIPPPSA AISEETSPPA KNKKQQKLSH ARKEVAEEEN
101: VTAKTDIEDC KISDDGINSE VSKDDTSPSS ESSQGVTPSP LSRKARRKRN AKKPQIPQ
101: VTAKTDIEDC KISDDGINSE VSKDDTSPSS ESSQGVTPSP LSRKARRKRN AKKPQIPQ
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT1G27090.1); Has 51 Blast hits to 50 proteins in 15 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). [Source:TAIR;Acc:AT3G24690]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.