Factsheet for TraesCS4B01G029200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G027100.2	Wheat	plastid	92.78	91.38
TraesCS4A01G283500.3	Wheat	plastid	92.56	90.38
HORVU7Hr1G119250.1	Barley	cytosol	21.01	89.72
HORVU3Hr1G093520.1	Barley	cytosol	12.91	88.06
HORVU4Hr1G004410.3	Barley	plastid	84.25	86.13
HORVU7Hr1G119330.1	Barley	cytosol	10.94	75.76
HORVU1Hr1G071550.1	Barley	cytosol	10.5	72.73
EER93647	Sorghum	plastid	60.83	59.78
Os03t0688200-01	Rice	plastid	58.86	57.73
Zm00001d013528_P001	Maize	plasma membrane	57.33	57.33
Zm00001d033549_P003	Maize	mitochondrion, plasma membrane	56.24	56.86
TraesCS4B01G030200.1	Wheat	cytosol	13.79	52.94
GSMUA_Achr4P22310_001	Banana	nucleus	36.98	38.15
VIT_01s0026g01470.t01	Wine grape	cytosol	35.45	36.49
KRH69381	Soybean	nucleus	35.45	36.4
KRH74755	Soybean	nucleus	35.45	36.32
GSMUA_Achr4P17410_001	Banana	nucleus	27.13	34.64
PGSC0003DMT400019928	Potato	nucleus	32.39	33.87
Solyc01g010440.2.1	Tomato	nucleus	32.6	33.71
PGSC0003DMT400045462	Potato	nucleus	30.63	32.71
AT3G24690.1	Thale cress	mitochondrion	11.16	32.28
Solyc05g006900.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	22.32	31.0
CDX90857	Canola	nucleus	8.1	28.68
CDY21298	Canola	nucleus	8.32	28.57
CDY16672	Canola	cytosol, mitochondrion, nucleus, plastid	10.07	28.57
Bra029489.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	10.07	28.57
CDX94550	Canola	nucleus	10.28	28.48
KRH75984	Soybean	cytosol	13.13	28.3
KRH74859	Soybean	peroxisome	22.54	27.84
TraesCS4B01G032400.1	Wheat	cytosol	41.14	27.09
Bra000790.1-P	Field mustard	nucleus	6.78	24.22
TraesCS3B01G283500.1	Wheat	cytosol	6.13	11.48

Protein Annotations

EnsemblPlants:TraesCS4B01G029200.1

EnsemblPlantsGene:TraesCS4B01G029200

SEG:seg

MapMan:35.2

Description

No Description!

Coordinates

chr4B:-:21477013..21481560

Molecular Weight (calculated)

48014.8 Da

IEP (calculated)

4.979

GRAVY (calculated)

-0.701

Length

457 amino acids

Sequence
(BLAST)

001: MAASPTASAS GSAAAAAAAA SEANDGPTLS VVTKRLRALR KKQNRIAQME EAVAAGKTLN QEQKEVMRSK PTLAAVIDEL ERLRAPLAVA VAEEVSVAPA
101: PAPAPAPEPS GSDSSVQDLL ALVYFGTLFD VKPQSDFIAT MVAREHERSS CITYDCVGDD TVDLLVEGDL DVVSAVAALA AARPASAVGV SHRDALQACA
201: HHARLWLARA DEPIHPGSSV TYAAVRAKLD RIMASDYYTA AAVGGGSYGA EGVQAQESMT ASPEASAVEE NLAAEGHKEE KEDSHATEIY NDHQSDSADV
301: QNVDREAPVN PPEEYPSVQA EQEKFDMEEQ DERDAEPKEQ QFQHPRRSHQ NQRGGGRGRR GAYPNGRGGR GGGRGMGGGY QNGRGYQGGG GGYQGGGGGY
401: QNGRGGGGGY YNNNEEGYYQ PRNFNNRGRG GRSGGGNSYY SNQGGGHAYA ERVEANA

Best Arabidopsis Sequence Match ( AT1G27090.1 )
(BLAST)

001: MAATASSEAS EGPVMGLINK RLRALRKKYN RITQMEESIS QGKTLNKEQE EVLRSKPAVV ILIDELEKIR APLSAAVTEE ISLATQLNRA SSDQTTASEQ
101: KEVTDIPQEV SGGDDGAKLE DLVNFLYFGS LFDVKSQNEF TSIMLTRTHE RSCCLSYDYV TDDATDLLGD RDLDSISQLW SLMVSRPVDS SLSHKNALER
201: CVEHAKLWLA NSEQPIESNC NTSYAALREK LKKIMASDYF TTTPEMKAPV DVAAAAGNYT SYQVPVDVEA SGHYQQKEED ASNSKEVESV VNDQSQQDEH
301: QKVELVTEGE VVHGQQEQGY TQVGGAENAK RDYVPRGSYQ NQRGRRGARR GGGGYQNGRG GRGGGGGYQN GRYESYDQSG GNGYQRNYYN NRGRGRGGGG
401: GGGNGHSYNN YQDPNVAVAS

Arabidopsis Description

Glycine-rich protein [Source:UniProtKB/TrEMBL;Acc:Q9LFX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.