Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47956 | Canola | plastid | 76.36 | 78.17 |
| CDY12577 | Canola | mitochondrion, plastid | 77.52 | 74.63 |
| KRH15453 | Soybean | extracellular, golgi, plastid | 23.26 | 65.93 |
| Bra041008.1-P | Field mustard | mitochondrion, plastid | 74.03 | 64.53 |
| VIT_18s0001g08630.t01 | Wine grape | plastid | 58.53 | 58.08 |
| GSMUA_Achr4P07390_001 | Banana | plastid | 53.49 | 51.88 |
| KRH05538 | Soybean | plastid | 51.94 | 50.0 |
| Solyc04g077500.2.1 | Tomato | plastid | 55.04 | 49.48 |
| Zm00001d031553_P001 | Maize | endoplasmic reticulum, extracellular | 18.99 | 49.0 |
| PGSC0003DMT400012587 | Potato | plastid | 54.26 | 48.78 |
| EER90941 | Sorghum | plastid | 50.0 | 48.5 |
| Os03t0729100-01 | Rice | plastid | 41.09 | 48.4 |
| Zm00001d033873_P001 | Maize | plastid | 48.06 | 47.51 |
| TraesCS4D01G059100.1 | Wheat | plastid | 48.45 | 46.64 |
| TraesCS4A01G255600.1 | Wheat | plastid | 47.67 | 46.59 |
| TraesCS4B01G059400.1 | Wheat | plastid | 44.96 | 43.61 |
Protein Annotations
| MapMan:35.2 | EntrezGene:841058 | ProteinID:AAF78277.1 | ProteinID:AEE32064.1 | EMBL:AF370316 | ArrayExpress:AT1G44920 |
| EnsemblPlantsGene:AT1G44920 | RefSeq:AT1G44920 | TAIR:AT1G44920 | RefSeq:AT1G44920-TAIR-G | EnsemblPlants:AT1G44920.1 | TAIR:AT1G44920.1 |
| EMBL:AY063101 | Unigene:At.14888 | InterPro:DUF3054 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_564492.1 | PFAM:PF11255 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR35283 | UniProt:Q9LPD7 | TMHMM:TMhelix |
| UniParc:UPI00000A751A | SEG:seg | : | : | : | : |
Description
T12C22.21 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPD7]
Coordinates
chr1:-:16982904..16984444
Molecular Weight (calculated)
27716.5 Da
IEP (calculated)
10.683
GRAVY (calculated)
0.138
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MRMLVLRTPT GPVSAVRFIT KSKPSPFSSP DSWLLPAPNT HRSRPRVVLA LSNPDGSVNS KPSTSASQIP SSGDETVFVG QDNVPLEGVI QFDKPSSTSS
101: SNITKWGRVA LLAGGDVLAL LIFSAIGRFS HGFPVFSLDT LHTADPFIAG WFLSAYFLGG YAEEGRGMKG KSKAVVAAAK SWIVGTPLGI IIRSASSGHI
201: PAYSFVLVTM GSTAVLLIGW RALLFSVLPT ESKKKDDTYR KGSAFELFEL LTSLIRRW
101: SNITKWGRVA LLAGGDVLAL LIFSAIGRFS HGFPVFSLDT LHTADPFIAG WFLSAYFLGG YAEEGRGMKG KSKAVVAAAK SWIVGTPLGI IIRSASSGHI
201: PAYSFVLVTM GSTAVLLIGW RALLFSVLPT ESKKKDDTYR KGSAFELFEL LTSLIRRW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.