Factsheet for AT1G60810.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54767	Canola	cytosol	96.69	96.69
CDY40500	Canola	cytosol	96.45	96.45
CDY70177	Canola	cytosol	96.45	96.45
Bra027127.1-P	Field mustard	cytosol	95.98	95.98
AT1G10670.3	Thale cress	cytosol	95.04	90.74
KRH69592	Soybean	nucleus	89.36	89.36
KRH74568	Soybean	endoplasmic reticulum	88.89	88.89
PGSC0003DMT400075021	Potato	cytosol	81.32	87.76
PGSC0003DMT400065743	Potato	cytosol	87.47	87.47
Solyc05g005160.2.1	Tomato	unclear	87.47	87.47
PGSC0003DMT400035064	Potato	cytosol	87.23	87.23
KRH13833	Soybean	cytosol	86.76	86.76
KRH43605	Soybean	cytosol	86.76	86.76
Solyc04g039670.2.1	Tomato	unclear	83.92	84.32
VIT_01s0127g00260.t01	Wine grape	plastid	87.23	79.35
AT1G09430.1	Thale cress	cytosol	79.2	79.01
Zm00001d037566_P002	Maize	plastid	7.57	41.56

Protein Annotations

KEGG:00020+2.3.3.8	KEGG:00020+6.2.1.5	KEGG:00640+6.2.1.5	KEGG:00660+6.2.1.5	KEGG:00720+2.3.3.8	KEGG:00720+6.2.1.5
Gene3D:3.30.1490.20	Gene3D:3.30.470.20	Gene3D:3.40.50.261	MapMan:5.1.1.2.1	EntrezGene:842375	ProteinID:AAB71965.1
ProteinID:AAG51870.1	Symbol:ACLA-2	ProteinID:AEE33735.1	ProteinID:ANM58113.1	ArrayExpress:AT1G60810	EnsemblPlantsGene:AT1G60810
RefSeq:AT1G60810	TAIR:AT1G60810	RefSeq:AT1G60810-TAIR-G	EnsemblPlants:AT1G60810.2	InterPro:ATP-grasp_succ-CoA_synth-type	InterPro:ATP_grasp_subdomain_1
EMBL:AY081273	EMBL:AY128741	Unigene:At.19214	InterPro:Citrate-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003878	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006085	GO:GO:0006629	GO:GO:0006633
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009346	GO:GO:0009987	GO:GO:0016740
GO:GO:0016746	InterPro:IPR013815	InterPro:IPR016102	RefSeq:NP_001320572.1	RefSeq:NP_176280.1	UniProt:O22718
PFAM:PF08442	PFAM:PF16114	PANTHER:PTHR23118	PANTHER:PTHR23118:SF9	SUPFAM:SSF52210	SUPFAM:SSF56059
InterPro:Succinyl-CoA_synth-like	UniParc:UPI00000AA01A	SEG:seg	:	:	:

Description

ACLA-2ATP-citrate synthase alpha chain protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O22718]

Coordinates

chr1:-:22388527..22391165

Molecular Weight (calculated)

46762.3 Da

IEP (calculated)

4.913

GRAVY (calculated)

-0.116

Length

423 amino acids

Sequence
(BLAST)

001: MARKKIREYD SKRLVKEHFK RLSGQELPIR SVQINQETDL NELVEREPWL SSEKLVVKPD MLFGKRGKSG LVALNLDFAD VATFVKERLG KEVEMSGCKG
101: PITTFIVEPF VPHNEEFYLN IVSDRLGCSI SFSECGGIDI EENWDKVKTI TIPTGASLTF EICAPLVATL PLEIKGELED FIQVIFTLFE DLDFTFLEMN
201: PFTLVDGKPY PLDMRGELDD TAAFKNFKKW GDIEFPMPFG RVMSSTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIFVRRGGPN YQKGLAKMRS LGDEIGVPIE
401: VYGPEATMTG ICKEAIQYIT AAA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.