Factsheet for Bra027127.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54767	Canola	cytosol	99.29	99.29
AT1G60810.2	Thale cress	cytosol	95.98	95.98
Bra018425.1-P	Field mustard	cytosol	94.33	94.33
KRH69592	Soybean	nucleus	88.65	88.65
KRH74568	Soybean	endoplasmic reticulum	88.18	88.18
Solyc05g005160.2.1	Tomato	unclear	88.18	88.18
PGSC0003DMT400075021	Potato	cytosol	81.32	87.76
PGSC0003DMT400065743	Potato	cytosol	87.47	87.47
PGSC0003DMT400035064	Potato	cytosol	87.23	87.23
KRH13833	Soybean	cytosol	86.05	86.05
KRH43605	Soybean	cytosol	86.05	86.05
Solyc04g039670.2.1	Tomato	unclear	83.92	84.32
Bra030777.1-P	Field mustard	cytosol	80.38	80.19
VIT_01s0127g00260.t01	Wine grape	plastid	86.52	78.71
Zm00001d037566_P002	Maize	plastid	6.62	36.36

Protein Annotations

KEGG:00020+2.3.3.8	KEGG:00020+6.2.1.5	KEGG:00640+6.2.1.5	KEGG:00660+6.2.1.5	KEGG:00720+2.3.3.8	KEGG:00720+6.2.1.5
Gene3D:3.30.1490.20	Gene3D:3.30.470.20	Gene3D:3.40.50.261	MapMan:5.1.1.2.1	InterPro:ATP-grasp_succ-CoA_synth-type	InterPro:ATP_grasp_subdomain_1
EnsemblPlantsGene:Bra027127	EnsemblPlants:Bra027127.1	EnsemblPlants:Bra027127.1-P	InterPro:Citrate-bd	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:IPR013815	InterPro:IPR016102	UniProt:M4EEB5	PFAM:PF08442
PFAM:PF16114	PANTHER:PTHR23118	PANTHER:PTHR23118:SF9	SUPFAM:SSF52210	SUPFAM:SSF56059	InterPro:Succinyl-CoA_synth-like
UniParc:UPI00025426C1	SEG:seg	:	:	:	:

Description

AT1G60810 (E=3e-222) ACLA-2 | ACLA-2; ATP citrate synthase

Coordinates

chrA09:+:8667901..8670153

Molecular Weight (calculated)

46790.5 Da

IEP (calculated)

5.069

GRAVY (calculated)

-0.136

Length

423 amino acids

Sequence
(BLAST)

001: MARKKIREYD SKRLVKEHFK RLSGKELPIR SVQINQETDL NELVEKEPWL SSEKLVFKPD MLFCKRGKSG LVALKLDFAE VATFVKDRLG KEVEMSGCKG
101: PITTFIVEPF VPHNEEFYLN IVSDRLGCSI SFSECGGIDI EENWDKVKTI SVPTGSSLTP EICAPLVATL PLEIKGELED FIQVIFTLFQ DLDFTFLEMN
201: PFALVDGKPY PLDMRGELDD TAAFKNFKKW GDIEFPMPFG RVMSPTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPKE DEVLQYARVV IDCATANPDG KTRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIYVRRGGPN YQKGLAKMRS LGDEIGVPIE
401: VYGPEATMTG ICKEAIEYIT AAA

Best Arabidopsis Sequence Match ( AT1G60810.2 )
(BLAST)

001: MARKKIREYD SKRLVKEHFK RLSGQELPIR SVQINQETDL NELVEREPWL SSEKLVVKPD MLFGKRGKSG LVALNLDFAD VATFVKERLG KEVEMSGCKG
101: PITTFIVEPF VPHNEEFYLN IVSDRLGCSI SFSECGGIDI EENWDKVKTI TIPTGASLTF EICAPLVATL PLEIKGELED FIQVIFTLFE DLDFTFLEMN
201: PFTLVDGKPY PLDMRGELDD TAAFKNFKKW GDIEFPMPFG RVMSSTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIFVRRGGPN YQKGLAKMRS LGDEIGVPIE
401: VYGPEATMTG ICKEAIQYIT AAA

Arabidopsis Description

ACLA-2ATP-citrate synthase alpha chain protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O22718]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.