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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027127.1-P Field mustard cytosol 94.33 94.33
CDY20965 Canola cytosol 100.0 94.0
AT1G10670.3 Thale cress cytosol 95.98 91.65
KRH69592 Soybean nucleus 88.89 88.89
KRH74568 Soybean endoplasmic reticulum 88.42 88.42
PGSC0003DMT400075021 Potato cytosol 80.85 87.24
KRH13833 Soybean cytosol 87.0 87.0
PGSC0003DMT400065743 Potato cytosol 87.0 87.0
KRH43605 Soybean cytosol 86.76 86.76
PGSC0003DMT400035064 Potato cytosol 86.76 86.76
Solyc05g005160.2.1 Tomato unclear 86.52 86.52
Solyc04g039670.2.1 Tomato unclear 83.45 83.85
Bra030777.1-P Field mustard cytosol 80.14 79.95
VIT_01s0127g00260.t01 Wine grape plastid 87.47 79.57
Zm00001d037566_P002 Maize plastid 7.09 38.96
Protein Annotations
KEGG:00020+2.3.3.8KEGG:00020+6.2.1.5KEGG:00640+6.2.1.5KEGG:00660+6.2.1.5KEGG:00720+2.3.3.8KEGG:00720+6.2.1.5
Gene3D:3.30.1490.20Gene3D:3.30.470.20Gene3D:3.40.50.261MapMan:5.1.1.2.1InterPro:ATP-grasp_succ-CoA_synth-typeInterPro:ATP_grasp_subdomain_1
EnsemblPlantsGene:Bra018425EnsemblPlants:Bra018425.1EnsemblPlants:Bra018425.1-PInterPro:Citrate-bdGO:GO:0000003GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0003878GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0005975GO:GO:0006629
GO:GO:0006633GO:GO:0007275GO:GO:0007568GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009346GO:GO:0009605GO:GO:0009628GO:GO:0009790GO:GO:0009791GO:GO:0009908
GO:GO:0009911GO:GO:0009987GO:GO:0010025GO:GO:0015995GO:GO:0016043GO:GO:0016117
GO:GO:0016740GO:GO:0019252GO:GO:0043481GO:GO:0045793GO:GO:0045995GO:GO:0048366
InterPro:IPR013815InterPro:IPR016102UniProt:M4DPI4PFAM:PF08442PFAM:PF16114PANTHER:PTHR23118
PANTHER:PTHR23118:SF9SUPFAM:SSF52210SUPFAM:SSF56059InterPro:Succinyl-CoA_synth-likeUniParc:UPI0002547E72SEG:seg
Description
AT1G10670 (E=3e-221) ACLA-1 | ACLA-1; ATP citrate synthase
Coordinates
chrA05:-:8154294..8156399
Molecular Weight (calculated)
46683.4 Da
IEP (calculated)
5.273
GRAVY (calculated)
-0.109
Length
423 amino acids
Sequence
(BLAST)
001: MARKKIREYD SKRLVKEHFK RLSGNELPIR SVQINQTTDL NELVEKEPWL SSEKLVVKPD MLFGKRGKSG LVALKLDFAE VATFVKERLG KEVEMSGCIG
101: PITTFIVEPF VPHNEEFYLN VVSDRLGCSI SFSECGGIEI EENWDKVKTI FIQTGASLTP EVGAPLVATL PLEIKAEIEE FIKVIFTLFQ DLDFTFLEMN
201: PFTLVDGKPY PLDMRGELDD TAAFKNFKKW GDTEFPMPFG RVMSPTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRVLVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIYVRRGGPN YQKGLAKMRS LGGEIGVPIE
401: VYGPEATMTG ICKEAIQYIT AAA
Best Arabidopsis Sequence Match ( AT1G10670.1 )
(BLAST)
001: MARKKIREYD SKRLVKEHFK RLSGKELPIR SVQINETTDL NELVEKEPWL SSEKLVVKPD MLFGKRGKSG LVALKLDFAD VATFVKERLG KEVEMSGCKG
101: PITTFIVEPF VPHNEEYYLN VVSDRLGCSI SFSECGGIEI EENWDKVKTI FLPTGASLTP EICAPLVATL PLEIKAEIEE FIKVIFTLFQ DLDFTFLEMN
201: PFTLVDGSPY PLDMRGELDD TAAFKNFKKW GDIEFPLPFG RVMSPTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIFVRRGGPN YQKGLAKMRA LGDDIGVPIE
401: VYGPEATMTG ICKEAIQYIT AAA
Arabidopsis Description
ACLA-1ATP-citrate lyase A-1 [Source:UniProtKB/TrEMBL;Acc:F4I5V8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.