Factsheet for Zm00001d037566_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	extracellular, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018888_P001	Maize	cytosol	38.96	17.14
Zm00001d031177_P001	Maize	cytosol	38.96	15.96
Zm00001d050894_P001	Maize	cytosol	38.96	15.08
Zm00001d048627_P001	Maize	extracellular, plasma membrane	46.75	7.95
KRH74568	Soybean	endoplasmic reticulum	42.86	7.8
KRH69592	Soybean	nucleus	42.86	7.8
Zm00001d041593_P001	Maize	extracellular, plasma membrane	41.56	7.58
PGSC0003DMT400035064	Potato	cytosol	41.56	7.57
Solyc05g005160.2.1	Tomato	unclear	41.56	7.57
AT1G60810.2	Thale cress	cytosol	41.56	7.57
PGSC0003DMT400075021	Potato	cytosol	37.66	7.4
KRH43605	Soybean	cytosol	40.26	7.33
PGSC0003DMT400065743	Potato	cytosol	40.26	7.33
KRH13833	Soybean	cytosol	40.26	7.33
Solyc04g039670.2.1	Tomato	unclear	38.96	7.13
VIT_01s0127g00260.t01	Wine grape	plastid	42.86	7.1
Bra018425.1-P	Field mustard	cytosol	38.96	7.09
CDY54767	Canola	cytosol	37.66	6.86
CDY70177	Canola	cytosol	37.66	6.86
CDY40500	Canola	cytosol	37.66	6.86
AT1G10670.3	Thale cress	cytosol	38.96	6.77
CDY20965	Canola	cytosol	38.96	6.67
Bra027127.1-P	Field mustard	cytosol	36.36	6.62
CDY20608	Canola	cytosol	37.66	6.52
Zm00001d040984_P001	Maize	cytosol	1.3	1.02
Zm00001d010708_P001	Maize	extracellular	0.0	0.0
Zm00001d018129_P002	Maize	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d037566_P002	EnsemblPlants:Zm00001d037566_T002	EnsemblPlantsGene:Zm00001d037566	Gene3D:3.30.1490.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:ATP_grasp_subdomain_1	InterPro:IPR013815	PANTHER:PTHR23118	PANTHER:PTHR23118:SF18
ProteinID:AQK84368.1	ProteinID:AQK84369.1	SEG:seg	UniParc:UPI0008435E81	UniProt:A0A1D6LZ52	MapMan:35.1

Description

ATP-citrate synthase alpha chain protein 3

Coordinates

chr6:+:129913716..129916155

Molecular Weight (calculated)

8472.5 Da

IEP (calculated)

8.969

GRAVY (calculated)

-0.103

Length

77 amino acids

Sequence
(BLAST)

1: MPLLWPCHVH FLPPLSAHPP PPRVRARITG GCGTRPDMLF GKHGKSGLVA LNLDFDQVKE FIKERLGIEV EMGGCKA

Best Arabidopsis Sequence Match ( AT1G60810.1 )
(BLAST)

001: MARKKIREYD SKRLVKEHFK RLSGQELPIR SVQINQETDL NELVEREPWL SSEKLVVKPD MLFGKRGKSG LVALNLDFAD VATFVKERLG KEVEMSGCKG
101: PITTFIVEPF VPHNEEFYLN IVSDRLGCSI SFSECGGIDI EENWDKVKTI TIPTGASLTF EICAPLVATL PLEIKGELED FIQVIFTLFE DLDFTFLEMN
201: PFTLVDGKPY PLDMRGELDD TAAFKNFKKW GDIEFPMPFG RVMSSTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPKE DEVLQYARVV IDCATANPDG KSRALVIGGG IANFTDVAAT FNGIIRALKE KEAKLKAARM HIFVRRGGPN YQKGLAKMRS LGDEIGVPIE
401: VYGPEATMTG ICKEAIQYIT AAA

Arabidopsis Description

ACLA-2ATP-citrate synthase alpha chain protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O22718]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.