Factsheet for Zm00001d018888_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031177_P001	Maize	cytosol	94.86	88.3
Zm00001d050894_P001	Maize	cytosol	94.29	82.91
Zm00001d018129_P002	Maize	extracellular	37.71	73.33
Os11t0693800-01	Rice	plasma membrane	59.43	40.0
Zm00001d037566_P002	Maize	plastid	17.14	38.96
Zm00001d010708_P001	Maize	extracellular	37.14	34.57
EES09011	Sorghum	cytosol	78.29	32.39
Os11t0696200-01	Rice	cytosol	74.86	30.97
Zm00001d048627_P001	Maize	extracellular, plasma membrane	80.0	30.91
HORVU4Hr1G028600.1	Barley	cytosol	72.57	30.09
TraesCS4D01G142600.1	Wheat	cytosol	73.71	30.07
TraesCS4A01G172800.1	Wheat	cytosol	73.71	29.93
TraesCS4B01G144000.2	Wheat	cytosol	73.71	29.93
GSMUA_Achr11P...	Banana	cytosol	70.86	29.31
PGSC0003DMT400047154	Potato	cytosol	70.86	29.31
Solyc01g101040.2.1	Tomato	plastid	70.86	29.31
VIT_14s0060g00550.t01	Wine grape	cytosol	70.86	29.31
Zm00001d041593_P001	Maize	extracellular, plasma membrane	70.29	29.15
GSMUA_Achr1P15970_001	Banana	mitochondrion	69.71	28.84
KRH68403	Soybean	mitochondrion	69.71	28.84
CDY32179	Canola	cytosol	69.14	28.4
GSMUA_Achr8P06210_001	Banana	cytosol	68.57	28.37
CDY31092	Canola	cytosol	68.0	28.07
Bra030777.1-P	Field mustard	cytosol	67.43	27.83
AT1G09430.1	Thale cress	cytosol	65.71	27.12
KRG96682	Soybean	cytosol	21.14	17.7
CDY31089	Canola	plastid	16.0	13.59
Zm00001d040984_P001	Maize	cytosol	5.71	10.2
CDY67155	Canola	cytosol	3.43	3.73

Protein Annotations

EnsemblPlants:Zm00001d018888_P001	EnsemblPlants:Zm00001d018888_T001	EnsemblPlantsGene:Zm00001d018888	Gene3D:3.30.470.20	PANTHER:PTHR23118	PANTHER:PTHR23118:SF18
ProteinID:ONM51555.1	SUPFAM:SSF56059	UniParc:UPI00022099D5	UniProt:A0A1R3QCP8	MapMan:5.1.1.2.1	:

Description

ATP-citrate synthase alpha chain protein 3

Coordinates

chr7:-:8362395..8364782

Molecular Weight (calculated)

19639.5 Da

IEP (calculated)

5.298

GRAVY (calculated)

-0.189

Length

175 amino acids

Sequence
(BLAST)

001: MLFGKPGKSG LMALNLDFDQ VKEFIKERLG IERGWATLSA SQSVGGIEIE ENWDKVKTIF LPTEKPTTSD SCAPLIATHP LEAHRKFGDF IKGVFAVFHG
101: FGKYFSFLEM NPFAMVNGEP YPLDIRGELD DTTAFKNFKK WGGIEFPLPF GRVLSPTESF IHELDEKGVF HSADM

Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA

Arabidopsis Description

ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.