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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31092 Canola cytosol 93.66 94.1
AT1G09430.1 Thale cress cytosol 90.38 90.8
Solyc01g101040.2.1 Tomato plastid 86.85 87.47
PGSC0003DMT400047154 Potato cytosol 86.85 87.47
VIT_14s0060g00550.t01 Wine grape cytosol 86.62 87.23
TraesCS5A01G084700.1 Wheat unclear 84.74 85.34
GSMUA_Achr11P... Banana cytosol 84.74 85.34
Os11t0696200-01 Rice cytosol 84.74 85.34
TraesCS5D01G097100.1 Wheat golgi, unclear 84.51 85.11
HORVU5Hr1G022100.2 Barley cytosol 84.51 85.11
EES16175 Sorghum cytosol 84.27 85.07
TraesCS5B01G090600.1 Wheat cytosol 84.27 84.87
GSMUA_Achr1P15970_001 Banana mitochondrion 84.27 84.87
KRH68403 Soybean mitochondrion 84.04 84.63
Os12t0566300-01 Rice plastid 83.8 84.4
KRG96682 Soybean cytosol 41.31 84.21
Zm00001d041593_P001 Maize extracellular, plasma membrane 83.33 84.12
CDY31089 Canola plastid 40.61 83.98
GSMUA_Achr8P06210_001 Banana cytosol 83.33 83.92
EES09011 Sorghum cytosol 83.1 83.69
HORVU4Hr1G028600.1 Barley cytosol 82.86 83.65
TraesCS4D01G142600.1 Wheat cytosol 83.57 82.98
TraesCS4B01G144000.2 Wheat cytosol 83.57 82.6
TraesCS4A01G172800.1 Wheat cytosol 83.1 82.13
Zm00001d048627_P001 Maize extracellular, plasma membrane 83.1 78.15
CDY40500 Canola cytosol 77.0 77.54
CDY70177 Canola cytosol 77.0 77.54
CDY54767 Canola cytosol 77.0 77.54
Os11t0693800-01 Rice plasma membrane 46.95 76.92
CDY20608 Canola cytosol 76.29 73.03
CDY67155 Canola cytosol 27.46 72.67
CDY20965 Canola cytosol 76.76 72.67
Zm00001d018888_P001 Maize cytosol 28.4 69.14
Zm00001d018129_P002 Maize extracellular 14.55 68.89
Zm00001d031177_P001 Maize cytosol 29.58 67.02
HORVU5Hr1G013770.1 Barley cytosol 24.65 63.64
Zm00001d050894_P001 Maize cytosol 29.11 62.31
Zm00001d010708_P001 Maize extracellular 17.37 39.36
Protein Annotations
KEGG:00020+2.3.3.8KEGG:00020+6.2.1.5KEGG:00640+6.2.1.5KEGG:00660+6.2.1.5KEGG:00720+2.3.3.8KEGG:00720+6.2.1.5
Gene3D:3.30.1490.20Gene3D:3.30.470.20Gene3D:3.40.50.261MapMan:5.1.1.2.1GO:A0A078H450UniProt:A0A078H450
InterPro:ATP-grasp_succ-CoA_synth-typeInterPro:ATP_grasp_subdomain_1EnsemblPlants:CDY32179ProteinID:CDY32179ProteinID:CDY32179.1InterPro:Citrate-bd
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:GSBRNA2T00051560001
InterPro:IPR013815InterPro:IPR016102PFAM:PF08442PFAM:PF16114PANTHER:PTHR23118PANTHER:PTHR23118:SF18
MetaCyc:PWY-5172MetaCyc:PWY-5392MetaCyc:PWY-5537MetaCyc:PWY-5538MetaCyc:PWY-5690MetaCyc:PWY-5913
MetaCyc:PWY-6728MetaCyc:PWY-6969MetaCyc:PWY-7384SUPFAM:SSF52210SUPFAM:SSF56059InterPro:Succinyl-CoA_synth-like
UniPathway:UPA00223UniParc:UPI0004EDD83C::::
Description
BnaCnng06880DBnaCnng06880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H450]
Coordinates
chrLK032288:+:248643..251172
Molecular Weight (calculated)
47120.8 Da
IEP (calculated)
5.131
GRAVY (calculated)
-0.059
Length
426 amino acids
Sequence
(BLAST)
001: MARKKIREYD SKRLLKEHLK RLANINLQIR SAQVTEATDF TELTNQEAWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VAEFVKARLG SEVEMGGCKA
101: PITTFIVEPF VPHDQEYYLS VVSDRLGCTI SFSECGGIEI EENWDKVKTV FLPAEKPMTL EVCAPLIATL PLEVRGKIGS FIMGVFAVFQ DLDFSFLEMN
201: PFTLVDGEPY PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSPTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATADPDG RKRALLIGGG IANFTDVAAT FSGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGDELGVPLE
401: VTKTTYGVLA LLSVWVDTDF YKGWGF
Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)
001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA
Arabidopsis Description
ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.