Factsheet for Os11t0693800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018888_P001	Maize	cytosol	40.0	59.43
Zm00001d031177_P001	Maize	cytosol	39.62	54.79
Os11t0696200-01	Rice	cytosol	88.08	54.14
EES09011	Sorghum	cytosol	84.62	52.01
HORVU4Hr1G028600.1	Barley	cytosol	83.46	51.42
TraesCS4D01G142600.1	Wheat	cytosol	84.62	51.28
Zm00001d050894_P001	Maize	cytosol	39.23	51.26
TraesCS4B01G144000.2	Wheat	cytosol	84.23	50.81
TraesCS4A01G172800.1	Wheat	cytosol	84.23	50.81
Os12t0566300-01	Rice	plastid	81.92	50.35
GSMUA_Achr1P15970_001	Banana	mitochondrion	79.62	48.94
VIT_14s0060g00550.t01	Wine grape	cytosol	79.62	48.94
Solyc01g101040.2.1	Tomato	plastid	79.62	48.94
PGSC0003DMT400047154	Potato	cytosol	79.62	48.94
KRH68403	Soybean	mitochondrion	79.23	48.7
GSMUA_Achr11P...	Banana	cytosol	79.23	48.7
Zm00001d048627_P001	Maize	extracellular, plasma membrane	83.85	48.12
CDY31092	Canola	cytosol	77.31	47.41
GSMUA_Achr8P06210_001	Banana	cytosol	76.92	47.28
CDY32179	Canola	cytosol	76.92	46.95
AT1G09430.1	Thale cress	cytosol	76.15	46.7
Bra030777.1-P	Field mustard	cytosol	75.38	46.23
Zm00001d018129_P002	Maize	extracellular	12.69	36.67
Zm00001d010708_P001	Maize	extracellular	13.46	18.62
KRG96682	Soybean	cytosol	6.92	8.61
CDY67155	Canola	cytosol	3.85	6.21
CDY31089	Canola	plastid	3.46	4.37

Protein Annotations

EnsemblPlants:Os11t0693800-01	EnsemblPlantsGene:Os11g0693800	Gene3D:3.30.470.110	InterPro:ATP-grasp_succ-CoA_synth-type	KEGG:00020+6.2.1.5	KEGG:00640+6.2.1.5
KEGG:00660+6.2.1.5	KEGG:00720+6.2.1.5	PANTHER:PTHR23118	PANTHER:PTHR23118:SF18	PFAM:PF08442	ProteinID:BAT15333.1
SUPFAM:SSF56059	UniParc:UPI0000DD9D40	UniProt:A0A0P0Y5P9	MapMan:5.1.1.2.1	:	:

Description

Similar to ATP-citrate synthase. (Os11t0693800-01)

Coordinates

chr11:-:28335198..28338717

Molecular Weight (calculated)

29369.6 Da

IEP (calculated)

6.054

GRAVY (calculated)

-0.142

Length

260 amino acids

Sequence
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLAGIDLQIL SAQVTQSTDF TELVNQQPWL STMKLVVKPD MLFGKRGKSG LVALNLDIAQ VKEFVKERLG VEVEMGGCKA
101: PITTFIVEPF VPHDQEYYLS IVSERLGSTI SFSECGGIEI EENWDKVKTI FLSTEKPMTP DACAPLIATL PLEARGKIGD FIKGVFAVFQ DLDFSFLEMN
201: PFTIVNGEPY PLDMRGELDD TAAFKTSRSG EISNSHYHSV EFSVLQKALS MTWMRRQVHL

Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA

Arabidopsis Description

ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.