CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0696200-01	Rice	cytosol	95.27	95.27
HORVU4Hr1G028600.1	Barley	cytosol	93.14	93.36
TraesCS4D01G142600.1	Wheat	cytosol	94.09	92.77
TraesCS4B01G144000.2	Wheat	cytosol	93.85	92.11
EES16175	Sorghum	cytosol	91.73	91.94
TraesCS4A01G172800.1	Wheat	cytosol	93.62	91.88
Zm00001d048627_P001	Maize	extracellular, plasma membrane	97.4	90.95
KRG96682	Soybean	cytosol	44.21	89.47
Solyc01g101040.2.1	Tomato	plastid	88.89	88.89
VIT_14s0060g00550.t01	Wine grape	cytosol	88.89	88.89
GSMUA_Achr11P...	Banana	cytosol	88.65	88.65
PGSC0003DMT400047154	Potato	cytosol	88.42	88.42
GSMUA_Achr1P15970_001	Banana	mitochondrion	87.94	87.94
KRH68403	Soybean	mitochondrion	87.71	87.71
GSMUA_Achr8P06210_001	Banana	cytosol	87.47	87.47
CDY31092	Canola	cytosol	87.0	86.79
AT1G09430.1	Thale cress	cytosol	86.05	85.85
Bra030777.1-P	Field mustard	cytosol	86.05	85.85
CDY31089	Canola	plastid	41.61	85.44
Os11t0693800-01	Rice	plasma membrane	52.01	84.62
CDY32179	Canola	cytosol	83.69	83.1
Zm00001d018888_P001	Maize	cytosol	32.39	78.29
CDY67155	Canola	cytosol	29.08	76.4
Zm00001d031177_P001	Maize	cytosol	33.57	75.53
Zm00001d018129_P002	Maize	extracellular	15.6	73.33
Zm00001d050894_P001	Maize	cytosol	33.57	71.36
Zm00001d010708_P001	Maize	extracellular	17.97	40.43

Protein Annotations

KEGG:00020+2.3.3.8	KEGG:00020+6.2.1.5	KEGG:00640+6.2.1.5	KEGG:00660+6.2.1.5	KEGG:00720+2.3.3.8	KEGG:00720+6.2.1.5
Gene3D:3.30.1490.20	Gene3D:3.30.470.20	Gene3D:3.40.50.261	MapMan:5.1.1.2.1	EntrezGene:8086010	InterPro:ATP-grasp_succ-CoA_synth-type
InterPro:ATP_grasp_subdomain_1	UniProt:C5Y8E8	InterPro:Citrate-bd	EnsemblPlants:EES09011	ProteinID:EES09011	ProteinID:EES09011.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003878	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006085
GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009346
GO:GO:0009987	GO:GO:0016740	InterPro:IPR013815	InterPro:IPR016102	PFAM:PF08442	PFAM:PF16114
PANTHER:PTHR23118	PANTHER:PTHR23118:SF18	MetaCyc:PWY-5172	MetaCyc:PWY-5392	MetaCyc:PWY-5537	MetaCyc:PWY-5538
MetaCyc:PWY-5690	MetaCyc:PWY-5913	MetaCyc:PWY-6728	MetaCyc:PWY-6969	MetaCyc:PWY-7384	EnsemblPlantsGene:SORBI_3005G222200
SUPFAM:SSF52210	SUPFAM:SSF56059	unigene:Sbi.3767	InterPro:Succinyl-CoA_synth-like	UniParc:UPI0001A864E2	RefSeq:XP_002450023.1

Description

hypothetical protein

Coordinates

chr5:+:70860568..70871084

Molecular Weight (calculated)

46774.5 Da

IEP (calculated)

5.144

GRAVY (calculated)

-0.118

Length

423 amino acids

Sequence
(BLAST)

001: MARKKIREYD SKRLLREHLK RLAGIDLTIL SAQITQSTDF AELVSQQPWL STMKLVVKPD MLFGKRGKSG LVALNLDFDQ VKEFVKERLG VEIEMGGCKA
101: PITTFIVEPF VPHDQEYYLS IVSERLGSTI SFSECGGIEI EENWDKVKTI FLPTEKPMTP DSCAPLIATL PLEARGKIGD FIKGVFAVFQ DLDFSFLEMN
201: PFTMVNGEPY PLDMRGELDD TAAFKNFKKW GDIEFPLPFG RVLSSTESFI HELDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLNYARVV LDCATADPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KESKLKASRM HIYVRRGGPN YQSGLAKMRK LGAELGVPIE
401: VYGPEETMTG ICKQAIECIM AAA

Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA

Arabidopsis Description

ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.