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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G09430.1 Thale cress cytosol 96.46 96.46
CDY31089 Canola plastid 45.75 94.17
CDY32179 Canola cytosol 94.1 93.66
Solyc01g101040.2.1 Tomato plastid 91.27 91.49
PGSC0003DMT400047154 Potato cytosol 91.27 91.49
VIT_14s0060g00550.t01 Wine grape cytosol 90.8 91.02
KRG96682 Soybean cytosol 44.58 90.43
EES16175 Sorghum cytosol 88.68 89.1
GSMUA_Achr11P... Banana cytosol 88.68 88.89
GSMUA_Achr1P15970_001 Banana mitochondrion 88.68 88.89
TraesCS5D01G097100.1 Wheat golgi, unclear 88.21 88.42
KRH68403 Soybean mitochondrion 88.21 88.42
TraesCS5A01G084700.1 Wheat unclear 88.21 88.42
TraesCS5B01G090600.1 Wheat cytosol 87.97 88.18
HORVU5Hr1G022100.2 Barley cytosol 87.97 88.18
GSMUA_Achr8P06210_001 Banana cytosol 87.74 87.94
Os11t0696200-01 Rice cytosol 87.74 87.94
Os12t0566300-01 Rice plastid 87.74 87.94
Zm00001d041593_P001 Maize extracellular, plasma membrane 87.26 87.68
EES09011 Sorghum cytosol 86.79 87.0
HORVU4Hr1G028600.1 Barley cytosol 86.56 86.97
CDY67155 Canola cytosol 32.55 85.71
TraesCS4D01G142600.1 Wheat cytosol 86.56 85.55
TraesCS4B01G144000.2 Wheat cytosol 86.56 85.15
TraesCS4A01G172800.1 Wheat cytosol 86.08 84.69
Zm00001d048627_P001 Maize extracellular, plasma membrane 87.03 81.46
CDY40500 Canola cytosol 80.9 81.09
CDY70177 Canola cytosol 80.9 81.09
CDY54767 Canola cytosol 80.9 81.09
Os11t0693800-01 Rice plasma membrane 47.41 77.31
CDY20608 Canola cytosol 79.72 75.96
CDY20965 Canola cytosol 80.19 75.56
Zm00001d018888_P001 Maize cytosol 28.07 68.0
Zm00001d018129_P002 Maize extracellular 14.39 67.78
Zm00001d031177_P001 Maize cytosol 29.25 65.96
HORVU5Hr1G013770.1 Barley cytosol 25.0 64.24
Zm00001d050894_P001 Maize cytosol 29.25 62.31
Zm00001d010708_P001 Maize extracellular 16.98 38.3
Protein Annotations
KEGG:00020+2.3.3.8KEGG:00020+6.2.1.5KEGG:00640+6.2.1.5KEGG:00660+6.2.1.5KEGG:00720+2.3.3.8KEGG:00720+6.2.1.5
Gene3D:3.30.1490.20Gene3D:3.30.470.20Gene3D:3.40.50.261MapMan:5.1.1.2.1GO:A0A078H0V5UniProt:A0A078H0V5
InterPro:ATP-grasp_succ-CoA_synth-typeInterPro:ATP_grasp_subdomain_1EnsemblPlants:CDY31092ProteinID:CDY31092ProteinID:CDY31092.1InterPro:Citrate-bd
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:GSBRNA2T00047173001
InterPro:IPR013815InterPro:IPR016102PFAM:PF08442PFAM:PF16114PANTHER:PTHR23118PANTHER:PTHR23118:SF18
MetaCyc:PWY-5172MetaCyc:PWY-5392MetaCyc:PWY-5537MetaCyc:PWY-5538MetaCyc:PWY-5690MetaCyc:PWY-5913
MetaCyc:PWY-6728MetaCyc:PWY-6969MetaCyc:PWY-7384SUPFAM:SSF52210SUPFAM:SSF56059InterPro:Succinyl-CoA_synth-like
UniPathway:UPA00223UniParc:UPI0004EF386A::::
Description
BnaA08g26420DBnaA08g26420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0V5]
Coordinates
chrLK032267:-:206081..209001
Molecular Weight (calculated)
46797.6 Da
IEP (calculated)
5.042
GRAVY (calculated)
-0.079
Length
424 amino acids
Sequence
(BLAST)
001: MARKKIREYD SKRLLKEHLK RLANINLQIR SAQVTEATDF TELTNQEPWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VAEFVKARLG SEVEMGGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTV FLPAEKSMTL EVCAPLIATL PLEVRGKIGS FIMGVFAVFQ DLDFSFMEMN
201: PFTLVDGEPY PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSPTESFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATADPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGDELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA
Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)
001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA
Arabidopsis Description
ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.