Factsheet for TraesCS5B01G090600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G097100.1	Wheat	golgi, unclear	99.76	99.76
TraesCS5A01G084700.1	Wheat	unclear	99.05	99.05
HORVU5Hr1G022100.2	Barley	cytosol	99.05	99.05
EES16175	Sorghum	cytosol	94.33	94.55
Os12t0566300-01	Rice	plastid	93.62	93.62
Zm00001d041593_P001	Maize	extracellular, plasma membrane	93.38	93.6
PGSC0003DMT400047154	Potato	cytosol	90.07	90.07
Solyc01g101040.2.1	Tomato	plastid	90.07	90.07
GSMUA_Achr1P15970_001	Banana	mitochondrion	89.6	89.6
KRG96682	Soybean	cytosol	44.21	89.47
GSMUA_Achr11P...	Banana	cytosol	89.36	89.36
VIT_14s0060g00550.t01	Wine grape	cytosol	89.36	89.36
CDY31092	Canola	cytosol	88.18	87.97
GSMUA_Achr8P06210_001	Banana	cytosol	87.94	87.94
AT1G09430.1	Thale cress	cytosol	87.47	87.26
KRH68403	Soybean	mitochondrion	87.23	87.23
TraesCS4B01G144000.2	Wheat	cytosol	88.65	87.01
Bra030777.1-P	Field mustard	cytosol	87.0	86.79
CDY31089	Canola	plastid	41.13	84.47
CDY32179	Canola	cytosol	84.87	84.27
CDY67155	Canola	cytosol	28.13	73.91
HORVU5Hr1G013770.1	Barley	cytosol	27.66	70.91

Protein Annotations

KEGG:00020+2.3.3.8	KEGG:00020+6.2.1.5	KEGG:00640+6.2.1.5	KEGG:00660+6.2.1.5	KEGG:00720+2.3.3.8	KEGG:00720+6.2.1.5
Gene3D:3.30.1490.20	Gene3D:3.30.470.20	Gene3D:3.40.50.261	MapMan:5.1.1.2.1	InterPro:ATP-grasp_succ-CoA_synth-type	InterPro:ATP_grasp_subdomain_1
InterPro:Citrate-bd	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:IPR013815
InterPro:IPR016102	PFAM:PF08442	PFAM:PF16114	PANTHER:PTHR23118	PANTHER:PTHR23118:SF18	SUPFAM:SSF52210
SUPFAM:SSF56059	InterPro:Succinyl-CoA_synth-like	EnsemblPlantsGene:TraesCS5B01G090600	EnsemblPlants:TraesCS5B01G090600.1	:	:

Description

No Description!

Coordinates

chr5B:-:116892474..116896471

Molecular Weight (calculated)

46702.5 Da

IEP (calculated)

5.396

GRAVY (calculated)

-0.111

Length

423 amino acids

Sequence
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLAGIDLQIL SAQVTQSTDF TELSNQEPWL SSMKLVVKPD MLFGKRGKSG LVALNLDLAQ VRQFVKERLG VEVEMGGCKA
101: PITTFIVEPF VPHDQEYYLS IMSDRLGCTI SFSECGGIEI EENWDKVKTI FLPTGKPMTL DACAPLIATL PLEVRTKIGD FIRGSFSVFQ DLDFSFMEMN
201: PFTLVNGEPY PLDMRGELDD TAAFKNFKKW GDIEFPLPFG RVLSPSESYI HELDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPKE EEVLHYARVV LDCATADPDG RKRALLIGGG IANFTDVAAT FSGIIRALRE KESKLKAARV NIYVRRGGPN YQTGLAKMRA LGSELGLPIE
401: VYGPEATMTG ICKQAIDCVM AEA

Best Arabidopsis Sequence Match ( AT1G09430.1 )
(BLAST)

001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA

Arabidopsis Description

ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.