Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G084700.1 | Wheat | unclear | 72.12 | 28.13 |
| HORVU5Hr1G022100.2 | Barley | cytosol | 72.12 | 28.13 |
| TraesCS5D01G097100.1 | Wheat | golgi, unclear | 71.52 | 27.9 |
| TraesCS5B01G090600.1 | Wheat | cytosol | 70.91 | 27.66 |
| EES16175 | Sorghum | cytosol | 67.88 | 26.54 |
| Zm00001d041593_P001 | Maize | extracellular, plasma membrane | 67.27 | 26.3 |
| Os12t0566300-01 | Rice | plastid | 67.27 | 26.24 |
| Solyc01g101040.2.1 | Tomato | plastid | 65.45 | 25.53 |
| VIT_14s0060g00550.t01 | Wine grape | cytosol | 65.45 | 25.53 |
| GSMUA_Achr1P15970_001 | Banana | mitochondrion | 64.85 | 25.3 |
| PGSC0003DMT400047154 | Potato | cytosol | 64.85 | 25.3 |
| HORVU4Hr1G028600.1 | Barley | cytosol | 64.24 | 25.12 |
| GSMUA_Achr11P... | Banana | cytosol | 64.24 | 25.06 |
| CDY31092 | Canola | cytosol | 64.24 | 25.0 |
| AT1G09430.1 | Thale cress | cytosol | 64.24 | 25.0 |
| Bra030777.1-P | Field mustard | cytosol | 63.64 | 24.76 |
| CDY32179 | Canola | cytosol | 63.64 | 24.65 |
| KRH68403 | Soybean | mitochondrion | 61.82 | 24.11 |
| GSMUA_Achr8P06210_001 | Banana | cytosol | 61.21 | 23.88 |
| CDY67155 | Canola | cytosol | 1.82 | 1.86 |
| CDY31089 | Canola | plastid | 0.61 | 0.49 |
| KRG96682 | Soybean | cytosol | 0.61 | 0.48 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G013770.1 | EnsemblPlantsGene:HORVU5Hr1G013770 | Gene3D:3.30.470.110 | ncoils:Coil | PANTHER:PTHR23118 | PANTHER:PTHR23118:SF18 |
| SEG:seg | SUPFAM:SSF56059 | UniParc:UPI000B46073F | UniProt:A0A287QF76 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr5H:-:45909943..45911005
Molecular Weight (calculated)
14485.7 Da
IEP (calculated)
4.381
GRAVY (calculated)
0.161
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: XXVRQFVKER LGVEVEMGGC KAPITTFIVE PFVPHDQEYY LSIVSDRLGC TISFSECGGI EIEENWDKVK TIFLPTEKPM TLDACAPLIX XXXXXXXXXX
101: XXXXACAPLI ATLPLEVRTK IGDFIRGSFS VFQDLDFSFM EMXXXXXXXX XXXXXXXXXX XXLWR
101: XXXXACAPLI ATLPLEVRTK IGDFIRGSFS VFQDLDFSFM EMXXXXXXXX XXXXXXXXXX XXLWR
001: MARKKIREYD SKRLLKEHLK RLANIDLQIR SAQVTESTDF TELTNQESWL SSTKLVVKPD MLFGKRGKSG LVALKLDLAE VADFVKARLG TEVEMEGCKA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA
101: PITTFIVEPF VPHDQEYYLS IVSDRLGCTI SFSECGGIEI EENWDKVKTI FLPAEKSMTL EVCAPLIATL PLEVRAKIGN FIMGAFAVFQ DLDFSFMEMN
201: PFTLVDGEPF PLDMRGELDD TAAFKNFNKW GDIEFPLPFG RVLSSTENFI HGLDEKTSAS LKFTVLNPKG RIWTMVAGGG ASVIYADTVG DLGYASELGN
301: YAEYSGAPNE EEVLQYARVV IDCATTDPDG RKRALLIGGG IANFTDVAAT FNGIIRALRE KETRLKASRM HIYVRRGGPN YQTGLARMRA LGEELGVPLE
401: VYGPEATMTG ICKRAIDCIM LPDA
Arabidopsis Description
ACLA-3ATP-citrate synthase alpha chain protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O80526]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.